下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;Not declared的单位不会由 SAXSdb 猜测。
打开 SASBDB 原始条目
缓冲液与样品属性
采集条件与仪器
SASBDB 原始图
实验 I(q)
实验 I(q) log-log
Guinier 图
Kratky 图
P(r) 图
可Download文件
curve:来源记录
{
"path": "/data/saxsdb/sasbdb/entries/m6/sasdam6/source/SASDAM6.dat",
"role": "curve",
"sha256": "948fb087fbccc0e0001659824c762d3f9be0b7f28806df4298cc52f5269493ed",
"size": 67417,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDAM6.dat"
}full_entry_zip:来源记录与 ZIP 内部目录(2 项)
{
"path": "/data/saxsdb/sasbdb/entries/m6/sasdam6/source/SASDAM6.zip",
"role": "full_entry_zip",
"sha256": "50559352011e93d6484dcaeab9a5673daf7e4492ced862baab06b85e4eb2d3cb",
"size": 36669,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDAM6.zip",
"zip_member_count": 2,
"zip_members": [
{
"crc32": "dbe9ad8c",
"name": "SASDAM6/experimental_data/SASDAM6.dat",
"size": 67417
},
{
"crc32": "bb46945b",
"name": "SASDAM6/pddf/SASDAM6.out",
"size": 68305
}
],
"zip_validation": "central_directory_readable"
}pddf:来源记录
{
"path": "/data/saxsdb/sasbdb/entries/m6/sasdam6/source/SASDAM6.out",
"role": "pddf",
"sha256": "bc2cd698b52746d63a0d15b0032ca1eab5e7ca4050770e5eab57b3f56d0dbe5c",
"size": 68305,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDAM6.out"
}sascif:来源记录
{
"path": "/data/saxsdb/sasbdb/entries/m6/sasdam6/source/SASDAM6.sascif",
"role": "sascif",
"sha256": "d5f6391edc81258f9046fffbc176769490596031e60a100bb55b57813e8fa3cc",
"size": 127717,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDAM6.sascif"
}summary:来源记录
{
"path": "/data/saxsdb/sasbdb/entries/m6/sasdam6/source/summary.json",
"sha256": "8d28165472bcf4e3426bb8734ab02542a6fafec0628a94d438945a2ccc726b54",
"size": 6092,
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDAM6/"
}
全部来源字段(无筛选)
这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。
summary.json:134 个字段值
manifest.json:36 个字段值
查看完整 summary.json 原文
{
"code": "SASDAM6",
"status": "Published",
"type_of_curve": "Extrapolated to infinite dilution",
"angular_unit": "1/nm",
"project": {
"title": "Structure and catalytic mechanism of the evolutionarily unique bacterial chalcone isomerase.",
"publication": {
"title": "Structure and catalytic mechanism of the evolutionarily unique bacterial chalcone isomerase.",
"author_list": "Thomsen M, Tuukkanen A, Dickerhoff J, Palm GJ, Kratzat H, Svergun DI, Weisz K, Bornscheuer UT, Hinrichs W",
"journal": "Acta Crystallogr D Biol Crystallogr",
"doi": "10.1107/S1399004715001935",
"pmid": "25849401",
"published_date": "2015 Apr"
},
"status": "released",
"submitted_date": "2015-07-21",
"released_date": "2017-11-06"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDAM6.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDAM6.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAM6_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAM6_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDAM6_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAM6_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDAM6.sascif",
"experiment": {
"instrument": {
"detector": {
"type": null,
"name": "Pilatus 2M",
"resolution": null
},
"name": "PETRA III",
"city": "DESY; Hamburg",
"country": "Germany",
"beamline_name": "EMBL P12",
"beam_geometry": null,
"type_of_source": "X-ray synchrotron",
"point_source": null,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "Chalcone isomerase with Naringenin",
"short_name": "naringenin-CHI",
"sequence": ">tr|V9P0A9|V9P0A9_EUBRA Chalcone isomerase OS=Eubacterium ramulus GN=tai PE=1 SV=1\r\nMADFKFEPMRSLIYVDCVSEDYRPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQ\r\nGDRFGYARMQLTEHHWLVSDLDPRLEIKAIAETFPMDVLVWQGQIPAAAHTDAQIDSDGD\r\nAGNAARKSNNAEGNPFIFAFLPMWWEKDLKGKGRTIEDGANYRFNMTIGFPEGVDKAEGE\r\nKWLFEKVVPILQAAPECTRVLASAVKKDINGCVMDWVLEIWFENQSGWYKVMVDDMKALE\r\nKPSWAQQDAFPFLKPYHNVCSAAVADYTPSNNLANYRGYITMR",
"organism": "Eubacterium ramulus",
"uniprot_code": "V9P0A9",
"uniprot_range_first": null,
"uniprot_range_last": null,
"oligomerization": "hexamer",
"molecular_type": "protein",
"uniprot_sequence": "MADFKFEPMRSLIYVDCVSEDYRPKLQRWIYKVHIPDSISQFEPYVTKYAFYPSFPIPPQ\nGDRFGYARMQLTEHHWLVSDLDPRLEIKAIAETFPMDVLVWQGQIPAAAHTDAQIDSDGD\nAGNAARKSNNAEGNPFIFAFLPMWWEKDLKGKGRTIEDGANYRFNMTIGFPEGVDKAEGE\nKWLFEKVVPILQAAPECTRVLASAVKKDINGCVMDWVLEIWFENQSGWYKVMVDDMKALE\nKPSWAQQDAFPFLKPYHNVCSAAVADYTPSNNLANYRGYITMR",
"mw": 32.4,
"total_mw": 194.4,
"number_molecules": 6,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": null
}
],
"buffer": {
"name": "50 mM sodium phosphate",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 6.8,
"deuteration": null
},
"purity_method": null,
"name": "Naringenin-bound chalcone isomerase",
"ext_coefficient": null,
"contrast": 3.047,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": "EMBL-Hamburg",
"address": "Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany",
"full_name": "European Molecular Biology Laboratory (EMBL) - Hamburg outstation",
"webpage": "http://www.embl-hamburg.de/index.php"
}
],
"contributor_name": "Anne",
"contributor_surname": "Tuukkanen",
"orcid": null
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2013-09-23",
"storage_temperature": 10.0,
"cell_temperature": 10.0,
"exposure_time": 0.05,
"number_of_frames": 20,
"wavelength": 0.124,
"sample_detector_distance": 3.1,
"concentration_min": 0.77,
"concentration_max": 2.6,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.194,
"s_max": 4.458,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": null,
"i0_calibration_standard": null,
"description": "Concentrations used: 13.5 µM CHI, 1 mM naringenin.",
"experiment_description": null,
"tags": [],
"intensity_unit": null,
"experimental_mw": 194.0,
"experimental_mw_error": null,
"guinier_i0_mw": 190.0,
"guinier_i0_mw_error": null,
"porod_mw": 190.0,
"porod_mw_error": null,
"pddf_i0": 24640.0,
"pddf_i0_error": null,
"guinier_i0": 25322.6,
"guinier_i0_error": null,
"pddf_rg": 3.6,
"pddf_rg_error": null,
"guinier_rg": 3.71,
"guinier_rg_error": null,
"pddf_dmax": 11.0,
"pddf_dmax_error": 0.5,
"porod_volume": 320.0,
"porod_volume_error": 20.0,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": null,
"guinier_point_last": null,
"pddf_point_first": 1,
"pddf_point_last": 735,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDAM6_datloglog_img.png",
"symmetry": null,
"last_modified": "2023-06-21T07:56:39.492710+02:00",
"bragg_peak": []
}
查看完整 manifest.json 原文
{
"code": "SASDAM6",
"status": "success",
"started_at": "2026-08-11T15:12:19.123556+00:00",
"finished_at": "2026-08-11T15:12:27.670178+00:00",
"source_last_modified": "2023-06-21T07:56:39.492710+02:00",
"files": [
{
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDAM6/",
"path": "/data/saxsdb/sasbdb/entries/m6/sasdam6/source/summary.json",
"size": 6092,
"sha256": "8d28165472bcf4e3426bb8734ab02542a6fafec0628a94d438945a2ccc726b54"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDAM6.dat",
"path": "/data/saxsdb/sasbdb/entries/m6/sasdam6/source/SASDAM6.dat",
"size": 67417,
"sha256": "948fb087fbccc0e0001659824c762d3f9be0b7f28806df4298cc52f5269493ed",
"role": "curve"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDAM6.out",
"path": "/data/saxsdb/sasbdb/entries/m6/sasdam6/source/SASDAM6.out",
"size": 68305,
"sha256": "bc2cd698b52746d63a0d15b0032ca1eab5e7ca4050770e5eab57b3f56d0dbe5c",
"role": "pddf"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDAM6.sascif",
"path": "/data/saxsdb/sasbdb/entries/m6/sasdam6/source/SASDAM6.sascif",
"size": 127717,
"sha256": "d5f6391edc81258f9046fffbc176769490596031e60a100bb55b57813e8fa3cc",
"role": "sascif"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDAM6.zip",
"path": "/data/saxsdb/sasbdb/entries/m6/sasdam6/source/SASDAM6.zip",
"size": 36669,
"sha256": "50559352011e93d6484dcaeab9a5673daf7e4492ced862baab06b85e4eb2d3cb",
"role": "full_entry_zip",
"zip_member_count": 2,
"zip_validation": "central_directory_readable"
}
]
}