SASDAX5

Endophilin-CoA complex

数据类型:SASBDB 实验数据 状态:Published 曲线类型:Single concentration 最后更新:2023-05-25T11:22:16.556436+02:00

1. 样品、组分与实验条件 Sample & Experiment

样品 1 · Endophilin-CoA complex

浓度— – 1.0 缓冲液 / pH50 mM TRIS-HCL 300 mM NaCl / 8.0
Experimental temperature设备 / 束线DORIS III, DESY / EMBL X33
波长— nm曝光— s × —

分子组分

组分类型 / OrganismUniProt 与Construct寡聚状态Molecular weight
Endophilin-A1 BAR domain
查看序列
MSVAGLKKQFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKGPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA
proteinMus musculus—–—dimer分子数 229.0 kDa
arachidonyl-CoAother—–—other分子数 —— kDa

实验曲线

曲线点数 / 列q range误差质量负强度点来源文件
12129[3]0.146461–4.99104 1/nm含误差列缺失 00sasbdb/entries/x5/sasdax5/source/SASDAX5.dat

2. SASBDB 报告的指标 Reported Results

指标方法数值误差单位
dmaxP(r)19.0nm
i0Guinier435.06
mwExperimental130.0kDa
porod_volumePorod480.0nm³
rgGuinier5.9nm

这些数值是 SASBDB 来源记录,不是 SAXSdb 对实验曲线重新计算的结果。

3. 来源拟合与模型 Source Fits & Models

4. 来源文件索引 Source Files

5. 实验说明与论文 Experiment & Publication

6. 完整来源记录 Complete Source Record

下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;Not declared的单位不会由 SAXSdb 猜测。

打开 SASBDB 原始条目

缓冲液与样品属性

缓冲液名称50 mM TRIS-HCL 300 mM NaCl缓冲液浓度50.0 mM
pH8.0添加剂NaCl 300.000 mM
缓冲液说明
纯度测定方法消光系数
吸收值散射对比度
比体积 / 干体积— / —混合物 / 氘代— / —

采集条件与仪器

测量日期2006-11-27储存 / 测量温度— / —
曝光时间帧数
波长样品-探测器距离
光源X-ray synchrotron探测器MAR 345 Image Plate
机构 / 束线DORIS III, DESY / EMBL X33 · Hamburg, Germany
q range0.146 – 4.991样品体积 / 流速— / —

SASBDB 原始图

实验 I(q)
实验 I(q)
实验 I(q) log-log
实验 I(q) log-log
Guinier 图
Guinier 图
Kratky 图
Kratky 图

可Download文件

类别文件状态大小校验值Download与查看
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pddfsasbdb/entries/x5/sasdax5/source/SASDAX5.outnot_listedDownload查看原文件
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curve:来源记录
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full_entry_zip:来源记录与 ZIP 内部目录(3 项)
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pddf:来源记录
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sascif:来源记录
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全部来源字段(无筛选)

这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。

summary.json:173 个字段值
字段路径原始值
codeSASDAX5
statusPublished
type_of_curveSingle concentration
angular_unit1/nm
project.titleEndophilin-A1 BAR domain interaction with arachidonyl CoA.
project.publication.titleEndophilin-A1 BAR domain interaction with arachidonyl CoA.
project.publication.author_listPetoukhov MV, Weissenhorn W, Svergun DI
project.publication.journalFront Mol Biosci
project.publication.doi10.3389/fmolb.2014.00020
project.publication.pmid25988161
project.publication.published_date2014
project.statusreleased
project.submitted_datenull
project.released_date2015-07-07
pddf_datanull
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experiment.instrument.detector.resolutionnull
experiment.instrument.nameDORIS III, DESY
experiment.instrument.cityHamburg
experiment.instrument.countryGermany
experiment.instrument.beamline_nameEMBL X33
experiment.instrument.beam_geometrynull
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
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experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameEndophilin-A1 BAR domain
experiment.sample.molecule[0].short_nameEndophilin
experiment.sample.molecule[0].sequenceMSVAGLKKQFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQP NPASRAKLSMINTMSKIRGQEKGPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEA MRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFDYKKKRQGKIPD EELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRL EERIRQA
experiment.sample.molecule[0].organismMus musculus
experiment.sample.molecule[0].uniprot_codenull
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experiment.sample.molecule[0].uniprot_range_lastnull
experiment.sample.molecule[0].oligomerizationdimer
experiment.sample.molecule[0].molecular_typeprotein
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experiment.sample.molecule[0].mw29.0
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experiment.sample.molecule[0].number_molecules2
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experiment.sample.buffer.name50 mM TRIS-HCL 300 mM NaCl
experiment.sample.buffer.concentration_unitmM
experiment.sample.buffer.commentnull
experiment.sample.buffer.additiveNaCl 300.000 mM
experiment.sample.buffer.concentration50.0
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph8.0
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameEndophilin-CoA complex
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
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experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_nameEMBL-Hamburg
experiment.contributor[0].affiliation[0].addressNotkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany
experiment.contributor[0].affiliation[0].full_nameEuropean Molecular Biology Laboratory (EMBL) - Hamburg outstation
experiment.contributor[0].affiliation[0].webpagehttp://www.embl-hamburg.de/index.php
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experiment.concentration_unitnull
experiment.date2006-11-27
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last_modified2023-05-25T11:22:16.556436+02:00
bragg_peak[]
manifest.json:33 个字段值
字段路径原始值
codeSASDAX5
statussuccess
started_at2026-08-11T14:58:15.731060+00:00
finished_at2026-08-11T14:58:23.479303+00:00
source_last_modified2023-05-25T11:22:16.556436+02:00
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查看完整 summary.json 原文
{
  "code": "SASDAX5",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/nm",
  "project": {
    "title": "Endophilin-A1 BAR domain interaction with arachidonyl CoA.",
    "publication": {
      "title": "Endophilin-A1 BAR domain interaction with arachidonyl CoA.",
      "author_list": "Petoukhov MV, Weissenhorn W, Svergun DI",
      "journal": "Front Mol Biosci",
      "doi": "10.3389/fmolb.2014.00020",
      "pmid": "25988161",
      "published_date": "2014"
    },
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}
查看完整 manifest.json 原文
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