The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.
Every source field is expanded here, including empty values, list members and fields already shown above.
View the complete summary.json source
{
"code": "SASDB55",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/nm",
"project": {
"title": "Structural basis of myelin-associated glycoprotein adhesion and signalling.",
"publication": {
"title": "Structural basis of myelin-associated glycoprotein adhesion and signalling.",
"author_list": "Pronker MF, Lemstra S, Snijder J, Heck AJ, Thies-Weesie DM, Pasterkamp RJ, Janssen BJ",
"journal": "Nat Commun",
"doi": "10.1038/ncomms13584",
"pmid": "27922006",
"published_date": "2016 Dec 6"
},
"status": "released",
"submitted_date": "2016-07-24",
"released_date": "2016-12-13"
},
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"name": "Pilatus 1M",
"resolution": 172.0
},
"name": "ESRF",
"city": "Grenoble",
"country": "France",
"beamline_name": "BM29",
"beam_geometry": "",
"type_of_source": "X-ray synchrotron",
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{
"long_name": "Myelin-associated glycoprotein Ig domains 1-5",
"short_name": "MAG",
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"organism": "Mus musculus",
"uniprot_code": "P20917",
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"oligomerization": "dimer",
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}
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"comment": null,
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"concentration": 25.0,
"pka": null,
"ph": 7.5,
"deuteration": null
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"name": "Glycosylated myelin-associated glycoprotein full extracellular domain (immunoglobulin domains 1-5)",
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"absorbption": null,
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},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": "Utrecht, Netherlands",
"full_name": "Utrecht University",
"webpage": "http://www.uu.nl/"
}
],
"contributor_name": "Matti",
"contributor_surname": "Pronker",
"orcid": null
}
],
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"concentration_unit": "mg/ml",
"date": "2014-09-11",
"storage_temperature": 20.0,
"cell_temperature": 20.0,
"exposure_time": 2.0,
"number_of_frames": 9,
"wavelength": 0.93,
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"s_min": 0.036,
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"description": "The model fit displayed in this entry represents the volume fraction weighted contributions of the myelin-associated glycoprotein monomer and dimer structures (determined from X-ray crystallography) present in the sample.",
"experiment_description": "X-ray synchrotron radiation scattering data from solutions of myelin-associated glycoprotein in 25 mM HEPES, 150 mM NaCl, pH 7.5 were collected on the BM29 camera on the storage ring ESRF (Grenoble, France) using a 2D Photon counting Pilatus 1M pixel detector (I(s) vs s, where s = 4π sin θ/λ; 2θ is the scattering angle). One solute concentration of 3.38 mg/ml was measured from nine successive 2 second frames. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted and the different curves were scaled for protein concentration. The low angle data collected were obtained from a single concentration scattering curve.",
"tags": [],
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"estimated_volume": null,
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"guinier_point_first": 11,
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"symmetry": null,
"last_modified": "2019-12-06T13:07:15.624532+01:00",
"bragg_peak": []
}View the complete manifest.json source
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