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缓冲液与样品属性
采集条件与仪器
SASBDB 原始图 实验 I(q) 实验 I(q) log-log Guinier 图 Kratky 图 P(r) 图
可下载文件
curve:来源记录 {
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} full_entry_zip:来源记录与 ZIP 内部目录(4 项) {
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全部来源字段(无筛选)
这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。
summary.json:151 个字段值
manifest.json:36 个字段值
查看完整 summary.json 原文 {
"code": "SASDBM9",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/nm",
"project": {
"title": "YeeF, a polymorphic toxin from Bacillus subtilis, is a ribosomal RNase with promiscuous DNA binding property",
"publication": null,
"status": "released",
"submitted_date": "2017-01-05",
"released_date": "2021-09-20"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDBM9.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDBM9.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDBM9_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDBM9_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDBM9_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDBM9_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDBM9.sascif",
"experiment": {
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"name": "Mythen 1K",
"resolution": 50.0
},
"name": "CSIR - Institute of Microbial Technology (IMTech)",
"city": "Chandigarh",
"country": "India",
"beamline_name": "Anton Paar SAXSpace",
"beam_geometry": null,
"type_of_source": "X-ray in house",
"point_source": null,
"line_collimation": null,
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"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "YezG, cognate immunity protein of YeeF",
"short_name": "YezG",
"sequence": "MDTPKMGDLYQRIANQINEMIPSEWENVYLYAEILDDSSEVYFYFNIPGKNEFLYSHNIPEHFNVSEDIY\r\nDDLLIELQESFEELREEYEKNNPETWTNLTLKLDRTGQFSIDYNYEDVIASELNGSQRKAVWVYKNLGLM\r\nPKRKTVRDFLEDYIKTNEGKI",
"organism": "Bacillus subtilis subsp. spizizenii",
"uniprot_code": "E0TU95",
"uniprot_range_first": null,
"uniprot_range_last": null,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "MDTPKMGDLYQRIANQINEMIPSEWENVYLYAEILDDSSEVYFYFNIPGKNEFLYSHNIP\nEHFNVSEDIYDDLLIELQESFEELREEYEKNNPETWTNLTLKLDRTGQFSIDYNYEDVIA\nSELNGSQRKAVWVYKNLGLMPKRKTVRDFLEDYIKTNEGKI",
"mw": 19.234,
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"number_molecules": 1,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
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"comment": null,
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"concentration": null,
"pka": null,
"ph": 7.5,
"deuteration": null
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"purity_method": null,
"name": "YezG: a cognate immunity protein of YeeF from Bacillus subtilis",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": "CSIR",
"address": "Chandigarh, India",
"full_name": "CSIR-Institute of Microbial Technology",
"webpage": "http://www.imtech.res.in/"
}
],
"contributor_name": "Krishan",
"contributor_surname": "Gopal",
"orcid": null
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2016-08-17",
"storage_temperature": 4.0,
"cell_temperature": 25.0,
"exposure_time": 1800.0,
"number_of_frames": 1,
"wavelength": 0.15418,
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"concentration_min": null,
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"flow_rate": null,
"s_min": 0.139,
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"model_mw": 29.918,
"bead_radius": 2.25,
"log": "https://www.sasbdb.org/media/log_files/yeefip.log",
"symmetry": "",
"comment": "",
"user": 196
}
],
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"pddf_software": "ATSAS GNOM",
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"i0_calibration_standard": null,
"description": null,
"experiment_description": "SAXS data from solutions of YezG in 20 mM HEPES 150 mM NaCl, pH 7.5 were collected on the IMTECH camera (Chandigarh, India) using a Diode 1D CMOS Mythen detector at a wavelength of λ = 0.15418 nm (I(s) vs s, where s = 4πsinθ/λ and 2θ is the scattering angle). A single solute concentration of 10 mg/ml was measured at 25°C for 1800 seconds. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted to produce the final scattering profile for this entry.",
"tags": [],
"intensity_unit": null,
"experimental_mw": 26.0,
"experimental_mw_error": null,
"guinier_i0_mw": null,
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"porod_mw": 28.4,
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"pddf_i0": 68570.0,
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"guinier_i0": 69307.0,
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"guinier_rg_error": null,
"pddf_dmax": 6.1,
"pddf_dmax_error": null,
"porod_volume": 45.58,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 5,
"guinier_point_last": 70,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDBM9_datloglog_img.png",
"symmetry": null,
"last_modified": "2021-09-20T13:31:35.480316+02:00",
"bragg_peak": []
}
查看完整 manifest.json 原文 {
"code": "SASDBM9",
"status": "success",
"started_at": "2026-08-11T16:17:32.323581+00:00",
"finished_at": "2026-08-11T16:17:41.163317+00:00",
"source_last_modified": "2021-09-20T13:31:35.480316+02:00",
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