Highly similar to Actin cross-linking family protein 7 (ACF7) Y259D mutant Homo Sapiens

{
  "code": "SASDBN3",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/nm",
  "project": {
    "title": "In vivo epidermal migration requires focal adhesion targeting of ACF7.",
    "publication": {
      "title": "In vivo epidermal migration requires focal adhesion targeting of ACF7.",
      "author_list": "Yue J, Zhang Y, Liang WG, Gou X, Lee P, Liu H, Lyu W, Tang WJ, Chen SY, Yang F, Liang H, Wu X",
      "journal": "Nat Commun",
      "doi": "10.1038/ncomms11692",
      "pmid": "27216888",
      "published_date": "2016 May 24"
    },
    "status": "released",
    "submitted_date": "2016-01-26",
    "released_date": "2016-09-19"
  },
  "pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDBN3.out",
  "intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDBN3.dat",
  "intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDBN3_dat_img.png",
  "intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDBN3_kratky_img.png",
  "pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDBN3_pofr_img.png",
  "intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDBN3_guinier_img.png",
  "sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDBN3.sascif",
  "experiment": {
    "instrument": {
      "detector": {
        "type": null,
        "name": "Pilatus 2M",
        "resolution": null
      },
      "name": "Advanced Photon Source (APS), Argonne National Laboratory",
      "city": "Lemont, IL",
      "country": "USA",
      "beamline_name": "12-ID-B SAXS/WAXS",
      "beam_geometry": null,
      "type_of_source": "X-ray synchrotron",
      "point_source": null,
      "line_collimation": null,
      "sample_path_length": null,
      "line_collimation_slitlength": null,
      "line_collimation_integrationwidth": null,
      "xray_energy": null,
      "beam_profile_ah": null,
      "beam_profile_al": null
    },
    "sample": {
      "molecule": [
        {
          "long_name": "cDNA FLJ45612 fis, clone BRTHA3025073, highly similar to Actin cross-linking family protein 7 Y259D mutant",
          "short_name": "ACF7-Y259D",
          "sequence": "MFPVLWAGIPGRDVGSLQPLPPGFKQFCTSASRVAVIADERDRVQKKTFTKWVNKHLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLPREKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIYISGESGDMSAKEKLLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFEVAERLGVTRLLDAEDVDVPSPDEKSVITYVSSIDDAFPKVPEGGEGISATEVDSRWQEYQSRVDSLIPWIKQHTILMSDKTFPQNPVELKALYNQYIHFKETEILAKEREKGRIEELYKLLEVWIEFGRIKLPQGYHPNDVEEEWGKLIIEMLEREKSLRPAVERLELLLQIANK",
          "organism": "Homo sapiens",
          "uniprot_code": "Q6ZSD7",
          "uniprot_range_first": 1,
          "uniprot_range_last": 400,
          "oligomerization": "monomer",
          "molecular_type": "protein",
          "uniprot_sequence": "MGNSLGCFKEPKESIAIPEKAPISPKKRVRFKRRWRGKKIPTPEASHQEETSEGTGVIEE\nTETLTKLTESLQKEDGVGGVEHTPPDILLPGDSAPNSRVVDRGMIVQVKERFQGEVQTAH\nLLLENESSVAGGVWDSLEEGMTVIAHLLDNPAERNCEKSVSQLVEFPRTASCSSRAVLLP\nLQGETAVEKGNIQRGFRSCALPRTDYPTDKGNQEQFSEGWSVEEGTKSVSGAPQTASWII\nECSVSSLLLDQPGGQRRTEPSHVGQVPPQDSRLPTSQSDLSISGVTVSILPSSSGYGSDG\nPHIHGIQPKDTEPEKSSTSFSEEDGTLSLEASHTPSWGLEEISDIYISGESGDMSAKEKL\nLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFE\nVAERLGVTRLLDAEDVDVPSPDEKSVITYVSSIYDAFPKVPEGGEGISAMEVDSRWQEYQ\nSRVDSLIPWIKQHTILMSDKTFPQNPVELKALYNQYIHFKETEILAKEREKGRIEELYKL\nLEVWIEFGRIKLPQGYHPNDVEEEWGKLIIEMLEREKSLRPAVERLELLLQIANKIQNGA\nLNCEEKLTLAKNTLQADAAHLESGQPVQCESDVIMYIQECEGLIRQLQVDLQILRDENYY\nQLEELAFRVMRLQDELVTLRLECTNLYRKGHFTSLELVPPSTLTTTHLKAEPLTKATHSS\nSTSWFRKPMTRAELVAISSSEDEGNLRFVYELLSWVEEMQMKLERAEWGNDLLSVELQLE\nTQPHIHTSVEELGSSVKEARLYEGKMSQNFHTSYAETLGKLETQYCKLKETSSFRMRHLQ\nSLHKFVSRATAELIWLNEKEEEELAYDWSDNNSNISAKRNYFSELTMELEEKQDVFRSLQ\nDTAELLSLENHPAKQTVEAYSAAVQSQLQWMKQPCLCVEQHVKENTAYFQFFSDARELES\nFLRNLQDSIKRKYSCDHNTSLSRLEDLLQDSMAQDEKEQLIQSKSSVASLVGRSKTIVQL\nKPRSPDHVLKNTISVKAVCDYRQIEGRTILSEGYGPLASAAC",
          "mw": 46.294,
          "total_mw": 46.294,
          "number_molecules": 1,
          "complex_state": false,
          "deuteration": null,
          "molecule_source": "biological",
          "molecule_description": null
        }
      ],
      "buffer": {
        "name": "PBS",
        "concentration_unit": null,
        "comment": null,
        "additive": null,
        "concentration": null,
        "pka": null,
        "ph": 7.4,
        "deuteration": null
      },
      "purity_method": null,
      "name": "Highly similar to Actin cross-linking family protein 7 (ACF7) Y259D mutant Homo Sapiens",
      "ext_coefficient": null,
      "contrast": null,
      "specific_vol": null,
      "dry_vol": null,
      "absorbption": null,
      "deuteration": null,
      "mixture": null
    },
    "contributor": [
      {
        "affiliation": [
          {
            "short_name": "Uchicago",
            "address": "Edward H. Levi Hall 5801 South Ellis Avenue Chicago, Illinois 60637 773.702.1234",
            "full_name": "The University of Chicago",
            "webpage": "http://www.uchicago.edu/"
          }
        ],
        "contributor_name": "Wenguang",
        "contributor_surname": "Liang",
        "orcid": null
      }
    ],
    "concentration_method": null,
    "concentration_unit": null,
    "date": "2014-11-07",
    "storage_temperature": 25.0,
    "cell_temperature": null,
    "exposure_time": 1.0,
    "number_of_frames": 30,
    "wavelength": null,
    "sample_detector_distance": null,
    "concentration_min": null,
    "concentration_max": 0.97,
    "sample_volume": null,
    "flow_rate": null,
    "s_min": 0.203,
    "s_max": 10.049,
    "total_exposure_time": null,
    "seccolumn": null
  },
  "fits": [],
  "estimated_volume_method": null,
  "pddf_software": "ATSAS GNOM",
  "pddf_software_version": null,
  "i0_calibration_standard": null,
  "description": null,
  "experiment_description": "Synchrotron X-ray scattering data from solutions of the N-terminal region of Human ACF7-Y259D mutant in PBS, pH 7.4 were collected on the 12ID-B SAXS/WAXS beam line of the Advanced Photon Source (Argonne National Laboratory, IL) using a Pilatus 2M detector (I(s) vs s, where s = 4π sin θ/λ, and 2θ is the scattering angle;λ = 0.0886 nm). One solute concentration of 0.97 mg/ml was measured. The SAXS data from 30 successive 1 s frames were normalized to the intensity of the transmitted beam and radially averaged and the scattering of the solvent-blank was subtracted.",
  "tags": [],
  "intensity_unit": null,
  "experimental_mw": 44.0,
  "experimental_mw_error": null,
  "guinier_i0_mw": null,
  "guinier_i0_mw_error": null,
  "porod_mw": 34.5,
  "porod_mw_error": null,
  "pddf_i0": 0.097,
  "pddf_i0_error": 0.004,
  "guinier_i0": 0.094,
  "guinier_i0_error": 0.001,
  "pddf_rg": 3.68,
  "pddf_rg_error": 0.18,
  "guinier_rg": 3.38,
  "guinier_rg_error": 0.12,
  "pddf_dmax": 13.5,
  "pddf_dmax_error": null,
  "porod_volume": 55.2,
  "porod_volume_error": null,
  "estimated_volume": null,
  "estimated_volume_error": null,
  "guinier_point_first": 9,
  "guinier_point_last": 32,
  "pddf_point_first": null,
  "pddf_point_last": null,
  "i0_calibration_standard_data": null,
  "intensities_log_log_plot": "SASDBN3_datloglog_img.png",
  "symmetry": null,
  "last_modified": "2023-03-02T16:54:16.648202+01:00",
  "bragg_peak": []
}

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  "finished_at": "2026-08-11T14:03:59.941224+00:00",
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