Surface presentation of antigens protein, SpaOc

{
  "code": "SASDC68",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/nm",
  "project": {
    "title": "Molecular Organization of Soluble Type III Secretion System Sorting Platform Complexes.",
    "publication": {
      "title": "Molecular Organization of Soluble Type III Secretion System Sorting Platform Complexes.",
      "author_list": "Bernal I, Börnicke J, Heidemann J, Svergun D, Horstmann JA, Erhardt M, Tuukkanen A, Uetrecht C, Kolbe M",
      "journal": "J Mol Biol",
      "doi": "10.1016/j.jmb.2019.07.004",
      "pmid": "31288030",
      "published_date": "2019 Sep 6"
    },
    "status": "released",
    "submitted_date": "2018-11-02",
    "released_date": "2019-09-13"
  },
  "pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDC68.out",
  "intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDC68.dat",
  "intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDC68_dat_img.png",
  "intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDC68_kratky_img.png",
  "pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDC68_pofr_img.png",
  "intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDC68_guinier_img.png",
  "sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDC68.sascif",
  "experiment": {
    "instrument": {
      "detector": {
        "type": null,
        "name": "Pilatus 2M",
        "resolution": null
      },
      "name": "PETRA III",
      "city": "DESY; Hamburg",
      "country": "Germany",
      "beamline_name": "EMBL P12",
      "beam_geometry": null,
      "type_of_source": "X-ray synchrotron",
      "point_source": null,
      "line_collimation": null,
      "sample_path_length": null,
      "line_collimation_slitlength": null,
      "line_collimation_integrationwidth": null,
      "xray_energy": null,
      "beam_profile_ah": null,
      "beam_profile_al": null
    },
    "sample": {
      "molecule": [
        {
          "long_name": "Surface presentation of antigens protein SpaO SpaO(SPOA2)",
          "short_name": "SpaOc",
          "sequence": "METLDIQHIEEENNTTET AETLPGLNQLPVKLEFVLYRKNVTLAELEA \r\nMGQQQLLSLPTNAELNVEIMANGVLLGNGELVQMNDTLGVEIHEWLSESGNGESAWSHPQFEK",
          "organism": "Salmonella enterica subsp. enterica serovar Typhimurium",
          "uniprot_code": "P40699",
          "uniprot_range_first": 203,
          "uniprot_range_last": 303,
          "oligomerization": "dimer",
          "molecular_type": "protein",
          "uniprot_sequence": "MSLRVRQIDRREWLLAQTATECQRHGREATLEYPTRQGMWVRLSDAEKRWSAWIKPGDWL\nEHVSPALAGAAVSAGAEHLVVPWLAATERPFELPVPHLSCRRLCVENPVPGSALPEGKLL\nHIMSDRGGLWFEHLPELPAVGGGRPKMLRWPLRFVIGSSDTQRSLLGRIGIGDVLLIRTS\nRAEVYCYAKKLGHFNRVEGGIIVETLDIQHIEEENNTTETAETLPGLNQLPVKLEFVLYR\nKNVTLAELEAMGQQQLLSLPTNAELNVEIMANGVLLGNGELVQMNDTLGVEIHEWLSESG\nNGE",
          "mw": 12.374,
          "total_mw": 24.748,
          "number_molecules": 2,
          "complex_state": false,
          "deuteration": null,
          "molecule_source": "biological",
          "molecule_description": null
        }
      ],
      "buffer": {
        "name": "20 mM HEPES pH 7.5, 150 mM NaCl",
        "concentration_unit": null,
        "comment": null,
        "additive": null,
        "concentration": null,
        "pka": null,
        "ph": 7.5,
        "deuteration": null
      },
      "purity_method": null,
      "name": "Surface presentation of antigens protein, SpaOc",
      "ext_coefficient": null,
      "contrast": null,
      "specific_vol": null,
      "dry_vol": null,
      "absorbption": null,
      "deuteration": null,
      "mixture": null
    },
    "contributor": [
      {
        "affiliation": [
          {
            "short_name": "EMBL-Hamburg",
            "address": "Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany",
            "full_name": "European Molecular Biology Laboratory (EMBL) - Hamburg outstation",
            "webpage": "http://www.embl-hamburg.de/index.php"
          }
        ],
        "contributor_name": "Anne",
        "contributor_surname": "Tuukkanen",
        "orcid": null
      }
    ],
    "concentration_method": null,
    "concentration_unit": null,
    "date": "2017-04-24",
    "storage_temperature": 20.0,
    "cell_temperature": 20.0,
    "exposure_time": 1.0,
    "number_of_frames": 3600,
    "wavelength": 0.124,
    "sample_detector_distance": null,
    "concentration_min": null,
    "concentration_max": 14.8,
    "sample_volume": null,
    "flow_rate": null,
    "s_min": 0.229,
    "s_max": 5.025,
    "total_exposure_time": null,
    "seccolumn": null
  },
  "fits": [],
  "estimated_volume_method": null,
  "pddf_software": "ATSAS GNOM",
  "pddf_software_version": null,
  "i0_calibration_standard": null,
  "description": null,
  "experiment_description": null,
  "tags": [],
  "intensity_unit": "arbitrary",
  "experimental_mw": 22.8,
  "experimental_mw_error": null,
  "guinier_i0_mw": null,
  "guinier_i0_mw_error": null,
  "porod_mw": null,
  "porod_mw_error": null,
  "pddf_i0": 4664.0,
  "pddf_i0_error": 6.0,
  "guinier_i0": 4561.9,
  "guinier_i0_error": 9.0,
  "pddf_rg": 2.66,
  "pddf_rg_error": 0.04,
  "guinier_rg": 2.54,
  "guinier_rg_error": 0.006,
  "pddf_dmax": 9.06,
  "pddf_dmax_error": null,
  "porod_volume": 50.6,
  "porod_volume_error": null,
  "estimated_volume": null,
  "estimated_volume_error": null,
  "guinier_point_first": 11,
  "guinier_point_last": 103,
  "pddf_point_first": null,
  "pddf_point_last": null,
  "i0_calibration_standard_data": null,
  "intensities_log_log_plot": "SASDC68_datloglog_img.png",
  "symmetry": null,
  "last_modified": "2023-06-21T07:56:39.492710+02:00",
  "bragg_peak": []
}

{
  "code": "SASDC68",
  "status": "success",
  "started_at": "2026-08-11T15:46:34.467991+00:00",
  "finished_at": "2026-08-11T15:46:43.477983+00:00",
  "source_last_modified": "2023-06-21T07:56:39.492710+02:00",
  "files": [
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDC68/",
      "path": "/data/saxsdb/sasbdb/entries/68/sasdc68/source/summary.json",
      "size": 5823,
      "sha256": "8ebe104d5f575796f6a2fae546ac43e8edb71edf42baa07199815c4b75fbeedb"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/intensities_files/SASDC68.dat",
      "path": "/data/saxsdb/sasbdb/entries/68/sasdc68/source/SASDC68.dat",
      "size": 81878,
      "sha256": "84f460eba367de0908f52e4672a9d65fe015e72de5270a6eca12147be26f7a62",
      "role": "curve"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/p_of_R_files/SASDC68.out",
      "path": "/data/saxsdb/sasbdb/entries/68/sasdc68/source/SASDC68.out",
      "size": 94027,
      "sha256": "da575b30e278da55425ded2157e523c8926d1292db341be09c1993e85b9c20bb",
      "role": "pddf"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDC68.sascif",
      "path": "/data/saxsdb/sasbdb/entries/68/sasdc68/source/SASDC68.sascif",
      "size": 156762,
      "sha256": "02c55f3039e035817ff4543e3ea6167f0f5721c9e86c70233c8256a2d3578995",
      "role": "sascif"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/zip_directories/SASDC68.zip",
      "path": "/data/saxsdb/sasbdb/entries/68/sasdc68/source/SASDC68.zip",
      "size": 47795,
      "sha256": "9fe6784d086de00a8fcb9594f64c281487884ad537eee3e0fcfb3bcc9c62b89b",
      "role": "full_entry_zip",
      "zip_member_count": 2,
      "zip_validation": "central_directory_readable"
    }
  ]
}