SASDC93

Tetrameric apoptosis regulator BAX (Bcl-2 associated X)

数据类型:SASBDB 实验数据 状态:Published 曲线类型:Single concentration 最后更新:2021-12-03T19:22:36.894202+01:00
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1. 样品、组分与实验条件 Sample & Experiment

样品 1 · Tetrameric apoptosis regulator BAX (Bcl-2 associated X)

浓度— – 2.0 缓冲液 / pH20mM sodium phosphate 100mM NaCl / 8.0
实验温度15.0 设备 / 束线Taiwan Photon Source, NSRRC / 23A
波长0.08266 nm曝光30.0 s × 2

分子组分

组分类型 / 物种UniProt 与构建体寡聚状态分子量
Apoptosis regulator BAX (Bcl-2 associated X)
查看序列
MDGSGEQPRGGGPTSSEQIMKTGALLLQGFIQDRAGRMGGEAPELALDPVPQDASTKKLSECLKRIGDELDSNMELQRMIAAVDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGTPTWQTVTIFVAGVLTASLTIWKKMG
proteinHomo sapiensQ078121–192tetramer分子数 421.184 kDa

实验曲线

曲线点数 / 列q 范围误差质量负强度点来源文件
1214[3]0.01444–0.29913 1/A含误差列缺失 02sasbdb/entries/93/sasdc93/source/SASDC93.dat
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2. SASBDB 报告的指标 Reported Results

指标方法数值误差单位
dmaxP(r)11.96—Å
i0Guinier0.02289230.00032—
i0P(r)0.023540.0002—
mwExperimental85.5—kDa
porod_volumePorod180.0—ų
rgGuinier3.6450.07Å
rgP(r)3.850.004Å

这些数值是 SASBDB 来源记录,不是 SAXSdb 对实验曲线重新计算的结果。

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3. 来源拟合与模型 Source Fits & Models

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4. 来源文件索引 Source Files

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5. 实验说明与论文 Experiment & Publication

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6. 完整来源记录 Complete Source Record

下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;未声明的单位不会由 SAXSdb 猜测。

打开 SASBDB 原始条目

缓冲液与样品属性

缓冲液名称20mM sodium phosphate 100mM NaCl缓冲液浓度—
pH8.0添加剂—
缓冲液说明20mM sodium phosphate, 100mM NaCl
纯度测定方法—消光系数—
吸收值—散射对比度—
比体积 / 干体积— / —混合物 / 氘代— / —

采集条件与仪器

测量日期2015-05-28储存 / 测量温度— / 15.0
曝光时间30.0帧数2
波长0.08266样品-探测器距离3.17
光源X-ray synchrotron探测器Pilatus 1M-F
机构 / 束线Taiwan Photon Source, NSRRC / 23A · Hsinchu, Taiwan
q 范围0.144 – 2.991样品体积 / 流速— / —

SASBDB 原始图

实验 I(q)
实验 I(q)
实验 I(q) log-log
实验 I(q) log-log
Guinier 图
Guinier 图
Kratky 图
Kratky 图
P(r) 图
P(r) 图

可下载文件

类别文件状态大小校验值下载与查看
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curve:来源记录
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full_entry_zip:来源记录与 ZIP 内部目录(6 项)
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pddf:来源记录
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sascif:来源记录
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全部来源字段(无筛选)

这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。

summary.json:156 个字段值
字段路径原始值
codeSASDC93
statusPublished
type_of_curveSingle concentration
angular_unit1/A
project.titleOligomerization process of Bcl-2 associated X protein revealed from intermediate structures in solution.
project.publication.titleOligomerization process of Bcl-2 associated X protein revealed from intermediate structures in solution.
project.publication.author_listShih O, Yeh YQ, Liao KF, Sung TC, Chiang YW, Jeng US
project.publication.journalPhys Chem Chem Phys
project.publication.doi10.1039/c6cp08820a
project.publication.pmid28262878
project.publication.published_date2017 Mar 15
project.statusreleased
project.submitted_date2017-05-03
project.released_date2017-05-05
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experiment.instrument.cityHsinchu
experiment.instrument.countryTaiwan
experiment.instrument.beamline_name23A
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experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameApoptosis regulator BAX (Bcl-2 associated X)
experiment.sample.molecule[0].short_nameBAX
experiment.sample.molecule[0].sequenceMDGSGEQPRGGGPTSSEQIMKTGALLLQGFIQDRAGRMGGEAPELALDPVPQDASTKKLSECLKRIGDELDSNMELQRMI AAVDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGTPTWQTVTIFVAGVLTASLTIWKKMG
experiment.sample.molecule[0].organismHomo sapiens
experiment.sample.molecule[0].uniprot_codeQ07812
experiment.sample.molecule[0].uniprot_range_first1
experiment.sample.molecule[0].uniprot_range_last192
experiment.sample.molecule[0].oligomerizationtetramer
experiment.sample.molecule[0].molecular_typeprotein
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experiment.sample.molecule[0].total_mw84.736
experiment.sample.molecule[0].number_molecules4
experiment.sample.molecule[0].complex_stateFalse
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experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionnull
experiment.sample.buffer.name20mM sodium phosphate 100mM NaCl
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.comment20mM sodium phosphate, 100mM NaCl
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph8.0
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameTetrameric apoptosis regulator BAX (Bcl-2 associated X)
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_namenull
experiment.contributor[0].affiliation[0].addressHsinchu City, Taiwan
experiment.contributor[0].affiliation[0].full_nameNational Synchrotron Radiation Research Center
experiment.contributor[0].affiliation[0].webpagehttps://www.nsrrc.org.tw/
experiment.contributor[0].contributor_nameOrion
experiment.contributor[0].contributor_surnameShih
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experiment.concentration_unitnull
experiment.date2015-05-28
experiment.storage_temperaturenull
experiment.cell_temperature15.0
experiment.exposure_time30.0
experiment.number_of_frames2
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experiment.sample_detector_distance3.17
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experiment.sample_volumenull
experiment.flow_ratenull
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experiment.s_max2.991
experiment.total_exposure_timenull
experiment.seccolumnnull
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pddf_softwareATSAS GNOM
pddf_software_versionnull
i0_calibration_standardnull
descriptionnull
experiment_descriptionSynchrotron SAXS data from solutions of tetrameric apoptosis regulator BAX (Bcl-2 associated X) in 20mM sodium phosphate, 100mM NaCl, pH 8 were collected on the 23A beam line at the Taiwan Photon Source (NSRRC, Hsinchu, Taiwan) using a Pilatus 1M-F detector at a sample-detector distance of 3.2 m and at a wavelength of λ = 0.08266 nm (I(s) vs s, where s = 4π sin θ/λ and 2θ is the scattering angle). One solute concentration of 2.00 mg/ml was measured at 15°C. Two successive 30 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted to obtain the SAXS profile displayed in this entry.
tags[]
intensity_unitnull
experimental_mw85.5
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mwnull
porod_mw_errornull
pddf_i00.02354
pddf_i0_error0.0002
guinier_i00.0228923
guinier_i0_error0.00032
pddf_rg3.85
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guinier_rg3.645
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pddf_dmax_errornull
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guinier_point_first5
guinier_point_last27
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDC93_datloglog_img.png
symmetrynull
last_modified2021-12-03T19:22:36.894202+01:00
bragg_peak[]
manifest.json:36 个字段值
字段路径原始值
codeSASDC93
statussuccess
started_at2026-08-11T13:55:11.624379+00:00
finished_at2026-08-11T13:55:20.614112+00:00
source_last_modified2021-12-03T19:22:36.894202+01:00
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查看完整 summary.json 原文
{
  "code": "SASDC93",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/A",
  "project": {
    "title": "Oligomerization process of Bcl-2 associated X protein revealed from intermediate structures in solution.",
    "publication": {
      "title": "Oligomerization process of Bcl-2 associated X protein revealed from intermediate structures in solution.",
      "author_list": "Shih O, Yeh YQ, Liao KF, Sung TC, Chiang YW, Jeng US",
      "journal": "Phys Chem Chem Phys",
      "doi": "10.1039/c6cp08820a",
      "pmid": "28262878",
      "published_date": "2017 Mar 15"
    },
    "status": "released",
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    "released_date": "2017-05-05"
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查看完整 manifest.json 原文
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