The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.
Every source field is expanded here, including empty values, list members and fields already shown above.
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{
"code": "SASDCP6",
"status": "Published",
"type_of_curve": "Merged",
"angular_unit": "1/A",
"project": {
"title": "Site-specific monoubiquitination downregulates Rab5 by disrupting effector binding and guanine nucleotide conversion.",
"publication": {
"title": "Site-specific monoubiquitination downregulates Rab5 by disrupting effector binding and guanine nucleotide conversion.",
"author_list": "Shin D, Na W, Lee JH, Kim G, Baek J, Park SH, Choi CY, Lee S",
"journal": "Elife",
"doi": "10.7554/eLife.29154",
"pmid": "28968219",
"published_date": "2017 Oct 2"
},
"status": "released",
"submitted_date": "2017-07-18",
"released_date": "2018-03-19"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDCP6.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDCP6.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCP6_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCP6_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDCP6_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCP6_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDCP6.sascif",
"experiment": {
"instrument": {
"detector": {
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"name": "ADSC Quantum 315",
"resolution": 315.0
},
"name": "Pohang Accelerator Laboratory",
"city": "Pohang",
"country": "South Korea",
"beamline_name": "4C",
"beam_geometry": "",
"type_of_source": "X-ray synchrotron",
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},
"sample": {
"molecule": [
{
"long_name": "Monoubiquitinated Rab5 at K165",
"short_name": "mUbRab5K165",
"sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN\r\nIQKESTLHLVLRLRGG\r\nMASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ\r\nTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR\r\nQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK\r\nLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN",
"organism": "Homo sapiens",
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"oligomerization": "monomer",
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"deuteration": null,
"molecule_source": "biological",
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}
],
"buffer": {
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"concentration_unit": null,
"comment": null,
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"concentration": null,
"pka": null,
"ph": 7.5,
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},
"purity_method": null,
"name": "Small GTPase Rab5 conjugated with ubiquitin at K165",
"ext_coefficient": null,
"contrast": null,
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"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": "Seoul, SK",
"full_name": "Sungkyunkwan University",
"webpage": "http://www.skku.edu/eng_home/index.jsp"
}
],
"contributor_name": "Donghyuk",
"contributor_surname": "Shin",
"orcid": null
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2016-11-21",
"storage_temperature": 4.0,
"cell_temperature": 4.0,
"exposure_time": 10.0,
"number_of_frames": 6,
"wavelength": 0.124,
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"concentration_min": 1.0,
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"s_min": 0.192,
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},
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"comment": "",
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},
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"tags": [],
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"pddf_i0": 10.74,
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"intensities_log_log_plot": "SASDCP6_datloglog_img.png",
"symmetry": null,
"last_modified": "2020-08-28T15:28:07.249807+02:00",
"bragg_peak": []
}
