SASDD75

'TG'-interacting factor homeodomain in solution (Homeobox protein TGIF1)

数据类型:SASBDB 实验数据 状态:Published 曲线类型:Single concentration 最后更新:2023-06-21T07:56:39.492710+02:00
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1. 样品、组分与实验条件 Sample & Experiment

样品 1 · 'TG'-interacting factor homeodomain in solution (Homeobox protein TGIF1)

浓度— – 6.0 缓冲液 / pH20 mM Tris, 150 mM NaCl / 7.4
实验温度20.0 设备 / 束线PETRA III / EMBL P12
波长0.124 nm曝光0.045 s × 120

分子组分

组分类型 / 物种UniProt 与构建体寡聚状态分子量
Homeobox protein TGIF1
查看序列
>TGIF1GPMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISE
proteinHomo sapiensQ15583151–248dimer分子数 211.709 kDa

实验曲线

曲线点数 / 列q 范围误差质量负强度点来源文件
11485[3]0.0950367–7.90131 1/nm含误差列缺失 034sasbdb/entries/75/sasdd75/source/SASDD75.dat
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2. SASBDB 报告的指标 Reported Results

指标方法数值误差单位
dmaxP(r)9.21—nm
i0Guinier11423.273.9arbitrary
i0P(r)11350.0—arbitrary
mwExperimental25.5—kDa
mwPorod26.0—kDa
porod_volumePorod42.0—nm³
rgGuinier2.70.05nm
rgP(r)2.753—nm

这些数值是 SASBDB 来源记录,不是 SAXSdb 对实验曲线重新计算的结果。

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3. 来源拟合与模型 Source Fits & Models

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4. 来源文件索引 Source Files

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5. 实验说明与论文 Experiment & Publication

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6. 完整来源记录 Complete Source Record

下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;未声明的单位不会由 SAXSdb 猜测。

打开 SASBDB 原始条目

缓冲液与样品属性

缓冲液名称20 mM Tris, 150 mM NaCl缓冲液浓度—
pH7.4添加剂—
缓冲液说明—
纯度测定方法—消光系数—
吸收值—散射对比度—
比体积 / 干体积— / —混合物 / 氘代— / —

采集条件与仪器

测量日期2016-10-18储存 / 测量温度10.0 / 20.0
曝光时间0.045帧数120
波长0.124样品-探测器距离1.5
光源X-ray synchrotron探测器Pilatus 2M
机构 / 束线PETRA III / EMBL P12 · DESY; Hamburg, Germany
q 范围0.095 – 7.901样品体积 / 流速— / —

SASBDB 原始图

实验 I(q)
实验 I(q)
实验 I(q) log-log
实验 I(q) log-log
Guinier 图
Guinier 图
Kratky 图
Kratky 图
P(r) 图
P(r) 图

可下载文件

类别文件状态大小校验值下载与查看
curvesasbdb/entries/75/sasdd75/source/SASDD75.datdownloaded686011a04c740b16d5100742ee783ebac93765f5e3a85a4ce67f29a52bee607707238下载查看原文件源站
full_entry_zipsasbdb/entries/75/sasdd75/source/SASDD75.zipdownloaded203067a9e90a3b5803e943e13aecd0f89897efb315351aac7c44eff7bdbf87b11b5812下载查看原文件源站
pddfsasbdb/entries/75/sasdd75/source/SASDD75.outdownloaded521026df2f31d465fd143fc66961f31592bfb50b5ef6138efd39e865ec30fd4e0dc7d下载查看原文件源站
sascifsasbdb/entries/75/sasdd75/source/SASDD75.sascifdownloaded995927b9884f57784a2aaa2f1390e034cdd9a4722e0007b7156365a7d0f93a480d410e下载查看原文件源站
summarysasbdb/entries/75/sasdd75/source/summary.jsondownloaded107346913939ea8602e8786159c8296e85816dadb5d40bb77fba56f372df96f02cd32下载查看原文件源站
curve:来源记录
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full_entry_zip:来源记录与 ZIP 内部目录(11 项)
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pddf:来源记录
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sascif:来源记录
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summary:来源记录
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全部来源字段(无筛选)

这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。

summary.json:235 个字段值
字段路径原始值
codeSASDD75
statusPublished
type_of_curveSingle concentration
angular_unit1/nm
project.title'TG' interacting factor
project.publicationnull
project.statusreleased
project.submitted_date2018-03-21
project.released_date2019-11-29
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experiment.instrument.detector.typenull
experiment.instrument.detector.namePilatus 2M
experiment.instrument.detector.resolutionnull
experiment.instrument.namePETRA III
experiment.instrument.cityDESY; Hamburg
experiment.instrument.countryGermany
experiment.instrument.beamline_nameEMBL P12
experiment.instrument.beam_geometrynull
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
experiment.instrument.line_collimation_slitlengthnull
experiment.instrument.line_collimation_integrationwidthnull
experiment.instrument.xray_energynull
experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameHomeobox protein TGIF1
experiment.sample.molecule[0].short_nameTGIF
experiment.sample.molecule[0].sequence>TGIF1 GPMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISE
experiment.sample.molecule[0].organismHomo sapiens
experiment.sample.molecule[0].uniprot_codeQ15583
experiment.sample.molecule[0].uniprot_range_first151
experiment.sample.molecule[0].uniprot_range_last248
experiment.sample.molecule[0].oligomerizationdimer
experiment.sample.molecule[0].molecular_typeprotein
experiment.sample.molecule[0].uniprot_sequenceMVLAQSRVSAGVGSPHCSGSGGGGSDSFPWPASHPGNPQCSFSTAFLASPRLSRGTLAYL PPAPWSSLATPSALLGSSCAPPPPPARCPQPRALSPELGTKAGPRRPHRWELPRSPSQGA QGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILR DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTIS RRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPS VICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSG LFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
experiment.sample.molecule[0].mw11.709
experiment.sample.molecule[0].total_mw23.418
experiment.sample.molecule[0].number_molecules2
experiment.sample.molecule[0].complex_stateFalse
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionnull
experiment.sample.buffer.name20 mM Tris, 150 mM NaCl
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph7.4
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.name'TG'-interacting factor homeodomain in solution (Homeobox protein TGIF1)
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_nameIRB
experiment.contributor[0].affiliation[0].addressBarcelona, Spain
experiment.contributor[0].affiliation[0].full_nameInstitute for Research in Biomedicine in Barcelona (IRB)
experiment.contributor[0].affiliation[0].webpagehttps://www.irbbarcelona.org
experiment.contributor[0].contributor_nameEwelina
experiment.contributor[0].contributor_surnameGuca
experiment.contributor[0].orcidnull
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2016-10-18
experiment.storage_temperature10.0
experiment.cell_temperature20.0
experiment.exposure_time0.045
experiment.number_of_frames120
experiment.wavelength0.124
experiment.sample_detector_distance1.5
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experiment.concentration_max6.0
experiment.sample_volumenull
experiment.flow_ratenull
experiment.s_min0.095
experiment.s_max7.901
experiment.total_exposure_timenull
experiment.seccolumnnull
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fits[2].p_value0.198541
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fits[2].descriptionnull
estimated_volume_methodnull
pddf_softwareATSAS GNOM
pddf_software_version5.0
i0_calibration_standardnull
descriptionnull
experiment_descriptionnull
tags[]
intensity_unitarbitrary
experimental_mw25.5
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mw26.0
porod_mw_errornull
pddf_i011350.0
pddf_i0_errornull
guinier_i011423.2
guinier_i0_error73.9
pddf_rg2.753
pddf_rg_errornull
guinier_rg2.7
guinier_rg_error0.05
pddf_dmax9.21
pddf_dmax_errornull
porod_volume42.0
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first1
guinier_point_last74
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDD75_datloglog_img.png
symmetrynull
last_modified2023-06-21T07:56:39.492710+02:00
bragg_peak[]
manifest.json:36 个字段值
字段路径原始值
codeSASDD75
statussuccess
started_at2026-08-11T14:40:52.469181+00:00
finished_at2026-08-11T14:41:02.272151+00:00
source_last_modified2023-06-21T07:56:39.492710+02:00
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查看完整 summary.json 原文
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查看完整 manifest.json 原文
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