SASDD86

Full-length human NHLRC2 ( NHL repeat-containing protein 2 )

数据类型:SASBDB 实验数据 状态:Published 曲线类型:Single concentration 最后更新:2019-12-06T13:07:15.624532+01:00
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1. 样品、组分与实验条件 Sample & Experiment

样品 1 · Full-length human NHLRC2 ( NHL repeat-containing protein 2 )

浓度— – 5.0 缓冲液 / pH20 mM BisTris, 100 mM NaCl, 2 mM DTT / 6.5
实验温度10.0 设备 / 束线Diamond Light Source / B21
波长0.1 nm曝光3.0 s × 60

分子组分

组分类型 / 物种UniProt 与构建体寡聚状态分子量
NHL repeat-containing protein 2
查看序列
MHHHHHHMAAPGGRGRSLSGLLPAQTSLEYALLDAVTQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYCCINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPMVNDADASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKIGIKLYKDSLPPSPLLFPGKVTVDQVTDRLVIADTGHHRILVVWKNGQIQYSIGGPNPGRKDGIFSESTFNSPQGVAIMNNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTDKEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELTKGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTLQFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIAAGDIENISSQPTISLQIPDDCLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQITDTQQGCIAPVELRYVF
proteinHomo sapiensQ8NBF21–726monomer分子数 180.4 kDa

实验曲线

曲线点数 / 列q 范围误差质量负强度点来源文件
11704[3]0.0039–0.39 1/A含误差列缺失 04sasbdb/entries/86/sasdd86/source/SASDD86.dat
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2. SASBDB 报告的指标 Reported Results

指标方法数值误差单位
dmaxP(r)14.69—Å
i0Guinier0.30080.0004arbitrary
i0P(r)0.30310.0011arbitrary
mwExperimental71.2—kDa
mwPorod71.2—kDa
porod_volumePorod121.0—ų
rgGuinier3.590.1Å
rgP(r)3.760.027Å

这些数值是 SASBDB 来源记录,不是 SAXSdb 对实验曲线重新计算的结果。

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3. 来源拟合与模型 Source Fits & Models

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4. 来源文件索引 Source Files

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5. 实验说明与论文 Experiment & Publication

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6. 完整来源记录 Complete Source Record

下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;未声明的单位不会由 SAXSdb 猜测。

打开 SASBDB 原始条目

缓冲液与样品属性

缓冲液名称20 mM BisTris, 100 mM NaCl, 2 mM DTT缓冲液浓度—
pH6.5添加剂—
缓冲液说明—
纯度测定方法—消光系数—
吸收值—散射对比度—
比体积 / 干体积— / —混合物 / 氘代— / —

采集条件与仪器

测量日期2017-07-08储存 / 测量温度4.0 / 10.0
曝光时间3.0帧数60
波长0.1样品-探测器距离4.0
光源X-ray synchrotron探测器Pilatus 2M
机构 / 束线Diamond Light Source / B21 · Didcot, UK
q 范围0.039 – 3.9样品体积 / 流速— / —

SASBDB 原始图

实验 I(q)
实验 I(q)
实验 I(q) log-log
实验 I(q) log-log
Guinier 图
Guinier 图
Kratky 图
Kratky 图
P(r) 图
P(r) 图

可下载文件

类别文件状态大小校验值下载与查看
curvesasbdb/entries/86/sasdd86/source/SASDD86.datdownloaded835457f0bd4f15f6247cdba6adcd8b7ab958d28de5794a47bd6fa03e9579850f00730下载查看原文件源站
full_entry_zipsasbdb/entries/86/sasdd86/source/SASDD86.zipdownloaded69277119895358774cebef04219e91992073797277258c723bbfdaa8a1bd7c66470a2下载查看原文件源站
pddfsasbdb/entries/86/sasdd86/source/SASDD86.outdownloaded860476e174403d43ceea0349525d93563106fe0d90aece92a0aa53bbe707284ddec82下载查看原文件源站
sascifsasbdb/entries/86/sasdd86/source/SASDD86.sascifdownloaded253127a9e2c65f5bc2dc439db607d3c5502c884a044b7d6328cab94250f9ca8e6f8a22下载查看原文件源站
summarysasbdb/entries/86/sasdd86/source/summary.jsondownloaded84171ea1231dc6cf7ba7220a2d0dfe9d2dbde6302a47500588517fdf8eff298a1d06下载查看原文件源站
curve:来源记录
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full_entry_zip:来源记录与 ZIP 内部目录(4 项)
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pddf:来源记录
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sascif:来源记录
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summary:来源记录
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全部来源字段(无筛选)

这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。

summary.json:156 个字段值
字段路径原始值
codeSASDD86
statusPublished
type_of_curveSingle concentration
angular_unit1/A
project.titleStructural analysis of human NHLRC2, mutations of which are associated with FINCA disease.
project.publication.titleStructural analysis of human NHLRC2, mutations of which are associated with FINCA disease.
project.publication.author_listBiterova E, Ignatyev A, Uusimaa J, Hinttala R, Ruddock LW
project.publication.journalPLoS One
project.publication.doi10.1371/journal.pone.0202391
project.publication.pmid30138417
project.publication.published_date2018
project.statusreleased
project.submitted_date2018-04-18
project.released_date2018-08-24
pddf_datahttps://www.sasbdb.org/media/p_of_R_files/SASDD86.out
intensities_datahttps://www.sasbdb.org/media/intensities_files/SASDD86.dat
intensities_log_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDD86_dat_img.png
intensities_kratky_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDD86_kratky_img.png
pddf_plothttps://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDD86_pofr_img.png
intensities_guinier_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDD86_guinier_img.png
sascif_datahttps://www.sasbdb.org/media/sascif/sascif_files/SASDD86.sascif
experiment.instrument.detector.typenull
experiment.instrument.detector.namePilatus 2M
experiment.instrument.detector.resolutionnull
experiment.instrument.nameDiamond Light Source
experiment.instrument.cityDidcot
experiment.instrument.countryUK
experiment.instrument.beamline_nameB21
experiment.instrument.beam_geometry1 x 5 mm
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
experiment.instrument.line_collimation_slitlengthnull
experiment.instrument.line_collimation_integrationwidthnull
experiment.instrument.xray_energynull
experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameNHL repeat-containing protein 2
experiment.sample.molecule[0].short_nameNHLRC2
experiment.sample.molecule[0].sequenceMHHHHHHMAAPGGRGRSLSGLLPAQTSLEYALLDAVTQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYCCINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPMVNDADASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKIGIKLYKDSLPPSPLLFPGKVTVDQVTDRLVIADTGHHRILVVWKNGQIQYSIGGPNPGRKDGIFSESTFNSPQGVAIMNNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTDKEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELTKGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTLQFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIAAGDIENISSQPTISLQIPDDCLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQITDTQQGCIAPVELRYVF
experiment.sample.molecule[0].organismHomo sapiens
experiment.sample.molecule[0].uniprot_codeQ8NBF2
experiment.sample.molecule[0].uniprot_range_first1
experiment.sample.molecule[0].uniprot_range_last726
experiment.sample.molecule[0].oligomerizationmonomer
experiment.sample.molecule[0].molecular_typeprotein
experiment.sample.molecule[0].uniprot_sequenceMAAPGGRGRSLSGLLPAQTSLEYALLDAVTQQEKDSLVYQYLQKVDGWEQDLSVPEFPEG LEWLNTEEPISVYKDLCGKIVVLDFFTYCCINCIHLLPDLHALEHTYSDKDGLLIIGVHS AKFPNEKVLDNIKSAVLRYNITHPMVNDADASLWQELEVSCWPTLVILGPRGNMLFSLIG EGHKDKLFLYTSIALKYYKDRGQIRDNKIGIKLYKDSLPPSPLLFPGKVTVDQVTDRLVI ADTGHHRILVVWKNGQIQYSIGGPNPGRKDGIFSESTFNSPQGVAIMNNIIYVADTENHL IRKIDLEAEKVSTVAGIGIQGTDKEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAM AGTHQIWALLLDSGKLPKKNELTKGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASE DPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLGV TWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIG ENGELLYVADTNNHQIKVMDLETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPS IRLSPVTACAGQTLQFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIAAGDIENIS SQPTISLQIPDDCLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQITDTQQGCIAPV ELRYVF
experiment.sample.molecule[0].mw80.4
experiment.sample.molecule[0].total_mw80.4
experiment.sample.molecule[0].number_molecules1
experiment.sample.molecule[0].complex_stateFalse
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionnull
experiment.sample.buffer.name20 mM BisTris, 100 mM NaCl, 2 mM DTT
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph6.5
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameFull-length human NHLRC2 ( NHL repeat-containing protein 2 )
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_namenull
experiment.contributor[0].affiliation[0].addressFinland
experiment.contributor[0].affiliation[0].full_nameUniversity of Oulu
experiment.contributor[0].affiliation[0].webpagehttps://www.oulu.fi
experiment.contributor[0].contributor_nameAlexander
experiment.contributor[0].contributor_surnameIgnatyev
experiment.contributor[0].orcidnull
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2017-07-08
experiment.storage_temperature4.0
experiment.cell_temperature10.0
experiment.exposure_time3.0
experiment.number_of_frames60
experiment.wavelength0.1
experiment.sample_detector_distance4.0
experiment.concentration_minnull
experiment.concentration_max5.0
experiment.sample_volumenull
experiment.flow_ratenull
experiment.s_min0.039
experiment.s_max3.9
experiment.total_exposure_timenull
experiment.seccolumnnull
fits[0].models[0].model_plothttps://www.sasbdb.org/media/pdb_file/images/SASDD86_fit1_model1_img.png
fits[0].models[0].softwareDAMFILT
fits[0].models[0].pdb_link[]
fits[0].models[0].model_titlenull
fits[0].models[0].type_of_modeldummy
fits[0].models[0].software_versionDAMFILT5.0
fits[0].models[0].model_datahttps://www.sasbdb.org/media/pdb_file/SASDD86_fit1_model1.pdb
fits[0].models[0].model_mw77.76
fits[0].models[0].bead_radius3.75
fits[0].models[0].lognull
fits[0].models[0].symmetryP1
fits[0].models[0].comment12 models were averaged and filtered
fits[0].models[0].user311
fits[0].fit_unit1/A
fits[0].fit_plothttps://www.sasbdb.org/media/fitting_files/scattering_plots/SASDD86_fit1_fit_img.png
fits[0].softwareDAMMIF
fits[0].chi_square_value2.682
fits[0].p_value0.10889
fits[0].fit_residual_plotSASDD86_fit1_fitresiduals_img.png
fits[0].fit_datahttps://www.sasbdb.org/media/fitting_files/SASDD86_fit1.fir
fits[0].fit_loghttps://www.sasbdb.org/media/fitting_files/log_files/NHLRC2_4.log
fits[0].software_versionnull
fits[0].descriptionnull
estimated_volume_methodnull
pddf_softwareATSAS GNOM
pddf_software_version5.0
i0_calibration_standardnull
descriptionnull
experiment_descriptionSynchrotron SAXS data from solutions of full-length human NHLRC2 (NHL repeat-containing protein 2 ) in 20 mM BisTris, 100 mM NaCl, 2 mM DTT, pH 6.5, were collected on the B21 beam line at the Diamond Light Source (Oxfordshire, UK) using a Pilatus 2M detector at a sample-detector distance of 4 m and at a wavelength of λ = 0.1 nm (l(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 5.00 mg/ml was measured at 10°C. 60 successive 3 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.
tags[]
intensity_unitarbitrary
experimental_mw71.2
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mw71.2
porod_mw_errornull
pddf_i00.3031
pddf_i0_error0.0011
guinier_i00.3008
guinier_i0_error0.0004
pddf_rg3.76
pddf_rg_error0.027
guinier_rg3.59
guinier_rg_error0.1
pddf_dmax14.69
pddf_dmax_errornull
porod_volume121.0
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first14
guinier_point_last143
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDD86_datloglog_img.png
symmetrynull
last_modified2019-12-06T13:07:15.624532+01:00
bragg_peak[]
manifest.json:36 个字段值
字段路径原始值
codeSASDD86
statussuccess
started_at2026-08-11T15:03:44.368910+00:00
finished_at2026-08-11T15:03:53.438414+00:00
source_last_modified2019-12-06T13:07:15.624532+01:00
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查看完整 summary.json 原文
{
  "code": "SASDD86",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/A",
  "project": {
    "title": "Structural analysis of human NHLRC2, mutations of which are associated with FINCA disease.",
    "publication": {
      "title": "Structural analysis of human NHLRC2, mutations of which are associated with FINCA disease.",
      "author_list": "Biterova E, Ignatyev A, Uusimaa J, Hinttala R, Ruddock LW",
      "journal": "PLoS One",
      "doi": "10.1371/journal.pone.0202391",
      "pmid": "30138417",
      "published_date": "2018"
    },
    "status": "released",
    "submitted_date": "2018-04-18",
    "released_date": "2018-08-24"
  },
  "pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDD86.out",
  "intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDD86.dat",
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  "pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDD86_pofr_img.png",
  "intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDD86_guinier_img.png",
  "sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDD86.sascif",
  "experiment": {
    "instrument": {
      "detector": {
        "type": null,
        "name": "Pilatus 2M",
        "resolution": null
      },
      "name": "Diamond Light Source",
      "city": "Didcot",
      "country": "UK",
      "beamline_name": "B21",
      "beam_geometry": "1 x 5 mm",
      "type_of_source": "X-ray synchrotron",
      "point_source": null,
      "line_collimation": null,
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      "beam_profile_al": null
    },
    "sample": {
      "molecule": [
        {
          "long_name": "NHL repeat-containing protein 2",
          "short_name": "NHLRC2",
          "sequence": "MHHHHHHMAAPGGRGRSLSGLLPAQTSLEYALLDAVTQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYCCINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPMVNDADASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKIGIKLYKDSLPPSPLLFPGKVTVDQVTDRLVIADTGHHRILVVWKNGQIQYSIGGPNPGRKDGIFSESTFNSPQGVAIMNNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTDKEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELTKGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTLQFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIAAGDIENISSQPTISLQIPDDCLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQITDTQQGCIAPVELRYVF",
          "organism": "Homo sapiens",
          "uniprot_code": "Q8NBF2",
          "uniprot_range_first": 1,
          "uniprot_range_last": 726,
          "oligomerization": "monomer",
          "molecular_type": "protein",
          "uniprot_sequence": "MAAPGGRGRSLSGLLPAQTSLEYALLDAVTQQEKDSLVYQYLQKVDGWEQDLSVPEFPEG\nLEWLNTEEPISVYKDLCGKIVVLDFFTYCCINCIHLLPDLHALEHTYSDKDGLLIIGVHS\nAKFPNEKVLDNIKSAVLRYNITHPMVNDADASLWQELEVSCWPTLVILGPRGNMLFSLIG\nEGHKDKLFLYTSIALKYYKDRGQIRDNKIGIKLYKDSLPPSPLLFPGKVTVDQVTDRLVI\nADTGHHRILVVWKNGQIQYSIGGPNPGRKDGIFSESTFNSPQGVAIMNNIIYVADTENHL\nIRKIDLEAEKVSTVAGIGIQGTDKEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAM\nAGTHQIWALLLDSGKLPKKNELTKGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASE\nDPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLGV\nTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIG\nENGELLYVADTNNHQIKVMDLETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPS\nIRLSPVTACAGQTLQFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIAAGDIENIS\nSQPTISLQIPDDCLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQITDTQQGCIAPV\nELRYVF",
          "mw": 80.4,
          "total_mw": 80.4,
          "number_molecules": 1,
          "complex_state": false,
          "deuteration": null,
          "molecule_source": "biological",
          "molecule_description": null
        }
      ],
      "buffer": {
        "name": "20 mM BisTris, 100 mM NaCl, 2 mM DTT",
        "concentration_unit": null,
        "comment": null,
        "additive": null,
        "concentration": null,
        "pka": null,
        "ph": 6.5,
        "deuteration": null
      },
      "purity_method": null,
      "name": "Full-length human NHLRC2 ( NHL repeat-containing protein 2 )",
      "ext_coefficient": null,
      "contrast": null,
      "specific_vol": null,
      "dry_vol": null,
      "absorbption": null,
      "deuteration": null,
      "mixture": null
    },
    "contributor": [
      {
        "affiliation": [
          {
            "short_name": null,
            "address": "Finland",
            "full_name": "University of Oulu",
            "webpage": "https://www.oulu.fi"
          }
        ],
        "contributor_name": "Alexander",
        "contributor_surname": "Ignatyev",
        "orcid": null
      }
    ],
    "concentration_method": null,
    "concentration_unit": null,
    "date": "2017-07-08",
    "storage_temperature": 4.0,
    "cell_temperature": 10.0,
    "exposure_time": 3.0,
    "number_of_frames": 60,
    "wavelength": 0.1,
    "sample_detector_distance": 4.0,
    "concentration_min": null,
    "concentration_max": 5.0,
    "sample_volume": null,
    "flow_rate": null,
    "s_min": 0.039,
    "s_max": 3.9,
    "total_exposure_time": null,
    "seccolumn": null
  },
  "fits": [
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      "models": [
        {
          "model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDD86_fit1_model1_img.png",
          "software": "DAMFILT",
          "pdb_link": [],
          "model_title": null,
          "type_of_model": "dummy",
          "software_version": "DAMFILT5.0",
          "model_data": "https://www.sasbdb.org/media/pdb_file/SASDD86_fit1_model1.pdb",
          "model_mw": 77.76,
          "bead_radius": 3.75,
          "log": null,
          "symmetry": "P1",
          "comment": "12 models were averaged and filtered",
          "user": 311
        }
      ],
      "fit_unit": "1/A",
      "fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDD86_fit1_fit_img.png",
      "software": "DAMMIF",
      "chi_square_value": 2.682,
      "p_value": 0.10889,
      "fit_residual_plot": "SASDD86_fit1_fitresiduals_img.png",
      "fit_data": "https://www.sasbdb.org/media/fitting_files/SASDD86_fit1.fir",
      "fit_log": "https://www.sasbdb.org/media/fitting_files/log_files/NHLRC2_4.log",
      "software_version": null,
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  "estimated_volume_method": null,
  "pddf_software": "ATSAS GNOM",
  "pddf_software_version": "5.0",
  "i0_calibration_standard": null,
  "description": null,
  "experiment_description": "Synchrotron SAXS data from solutions of full-length human NHLRC2 (NHL repeat-containing protein 2 ) in 20 mM BisTris, 100 mM NaCl, 2 mM DTT, pH 6.5, were collected on the B21 beam line at the Diamond Light Source (Oxfordshire, UK) using a Pilatus 2M detector at a sample-detector distance of 4 m and at a wavelength of λ = 0.1 nm (l(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 5.00 mg/ml was measured at 10°C. 60 successive 3 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.",
  "tags": [],
  "intensity_unit": "arbitrary",
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  "experimental_mw_error": null,
  "guinier_i0_mw": null,
  "guinier_i0_mw_error": null,
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  "pddf_dmax": 14.69,
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  "porod_volume": 121.0,
  "porod_volume_error": null,
  "estimated_volume": null,
  "estimated_volume_error": null,
  "guinier_point_first": 14,
  "guinier_point_last": 143,
  "pddf_point_first": null,
  "pddf_point_last": null,
  "i0_calibration_standard_data": null,
  "intensities_log_log_plot": "SASDD86_datloglog_img.png",
  "symmetry": null,
  "last_modified": "2019-12-06T13:07:15.624532+01:00",
  "bragg_peak": []
}
查看完整 manifest.json 原文
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