Bovine serum albumin mixture: averaged and individual data frames (subtracted and unsubtracted test sets)

{
  "code": "SASDDN3",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/nm",
  "project": {
    "title": "Machine Learning Methods for X-Ray Scattering Data Analysis from Biomacromolecular Solutions.",
    "publication": {
      "title": "Machine Learning Methods for X-Ray Scattering Data Analysis from Biomacromolecular Solutions.",
      "author_list": "Franke D, Jeffries CM, Svergun DI",
      "journal": "Biophys J",
      "doi": "10.1016/j.bpj.2018.04.018",
      "pmid": "29874600",
      "published_date": "2018 Jun 5"
    },
    "status": "released",
    "submitted_date": null,
    "released_date": "2018-06-07"
  },
  "pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDDN3.out",
  "intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDDN3.dat",
  "intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDDN3_dat_img.png",
  "intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDDN3_kratky_img.png",
  "pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDDN3_pofr_img.png",
  "intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDDN3_guinier_img.png",
  "sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDDN3.sascif",
  "experiment": {
    "instrument": {
      "detector": {
        "type": null,
        "name": "Pilatus 2M",
        "resolution": null
      },
      "name": "PETRA III",
      "city": "DESY; Hamburg",
      "country": "Germany",
      "beamline_name": "EMBL P12",
      "beam_geometry": null,
      "type_of_source": "X-ray synchrotron",
      "point_source": null,
      "line_collimation": null,
      "sample_path_length": null,
      "line_collimation_slitlength": null,
      "line_collimation_integrationwidth": null,
      "xray_energy": null,
      "beam_profile_ah": null,
      "beam_profile_al": null
    },
    "sample": {
      "molecule": [
        {
          "long_name": "Bovine serum albumin",
          "short_name": "BSA",
          "sequence": "DTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASL\r\nRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKY\r\nNGVFQECCQAEDKGACLLPKIETMREKVLTSSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKV\r\nHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQE\r\nAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEY\r\nGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESL\r\nVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAA\r\nDDKEACFAVEGPKLVVSTQTALA",
          "organism": "Bos taurus",
          "uniprot_code": "P02769",
          "uniprot_range_first": 25,
          "uniprot_range_last": 607,
          "oligomerization": "unknown",
          "molecular_type": "protein",
          "uniprot_sequence": "MKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPF\nDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEP\nERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYY\nANKYNGVFQECCQAEDKGACLLPKIETMREKVLASSARQRLRCASIQKFGERALKAWSVA\nRLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKE\nCCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRR\nHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEK\nLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLIL\nNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLP\nDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVV\nSTQTALA",
          "mw": 66.462,
          "total_mw": 66.462,
          "number_molecules": 0,
          "complex_state": false,
          "deuteration": null,
          "molecule_source": "biological",
          "molecule_description": null
        }
      ],
      "buffer": {
        "name": "50 mM HEPES",
        "concentration_unit": "mM",
        "comment": null,
        "additive": null,
        "concentration": 50.0,
        "pka": null,
        "ph": 7.5,
        "deuteration": null
      },
      "purity_method": null,
      "name": "Bovine serum albumin mixture: averaged and individual data frames (subtracted and unsubtracted test sets)",
      "ext_coefficient": null,
      "contrast": null,
      "specific_vol": null,
      "dry_vol": null,
      "absorbption": null,
      "deuteration": null,
      "mixture": null
    },
    "contributor": [
      {
        "affiliation": [
          {
            "short_name": "EMBL-Hamburg",
            "address": "Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany",
            "full_name": "European Molecular Biology Laboratory (EMBL) - Hamburg outstation",
            "webpage": "http://www.embl-hamburg.de/index.php"
          }
        ],
        "contributor_name": "Cy M",
        "contributor_surname": "Jeffries",
        "orcid": null
      }
    ],
    "concentration_method": null,
    "concentration_unit": null,
    "date": "2016-09-25",
    "storage_temperature": 10.0,
    "cell_temperature": 10.0,
    "exposure_time": 0.05,
    "number_of_frames": 100,
    "wavelength": 0.124,
    "sample_detector_distance": 3.1,
    "concentration_min": null,
    "concentration_max": 2.25,
    "sample_volume": null,
    "flow_rate": null,
    "s_min": 0.013,
    "s_max": 3.79,
    "total_exposure_time": null,
    "seccolumn": null
  },
  "fits": [],
  "estimated_volume_method": null,
  "pddf_software": "ATSAS GNOM",
  "pddf_software_version": "5.0",
  "i0_calibration_standard": null,
  "description": "The data displayed in this entry represents the averaged 1D-SAXS profile obtained from 100 individual SAXS data frames. Included in the full entry zip-archive are each of the individual subtracted SAXS profiles as well as each individual sample and buffer frame (100 in total).",
  "experiment_description": "Synchrotron SAXS data from a solution of bovine serum albumin (mixture) in 50 mM HEPES, pH 7.5, were collected on the EMBL-P12 beam line at the PETRA III storage ring (DESY, Hamburg, Germany) using a Pilatus 2M detector at a sample-detector distance of 3.1 m and at a wavelength of λ = 0.124 nm (l(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 2.25 mg/ml was measured at 10°C. 100 successive 0.050 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.",
  "tags": [],
  "intensity_unit": "arbitrary",
  "experimental_mw": 72.4,
  "experimental_mw_error": null,
  "guinier_i0_mw": null,
  "guinier_i0_mw_error": null,
  "porod_mw": 73.0,
  "porod_mw_error": null,
  "pddf_i0": 11640.0,
  "pddf_i0_error": null,
  "guinier_i0": 11597.7,
  "guinier_i0_error": 7.33,
  "pddf_rg": 3.067,
  "pddf_rg_error": null,
  "guinier_rg": 3.02,
  "guinier_rg_error": 0.18,
  "pddf_dmax": 11.0,
  "pddf_dmax_error": null,
  "porod_volume": 116.7,
  "porod_volume_error": null,
  "estimated_volume": null,
  "estimated_volume_error": null,
  "guinier_point_first": 21,
  "guinier_point_last": 200,
  "pddf_point_first": null,
  "pddf_point_last": null,
  "i0_calibration_standard_data": null,
  "intensities_log_log_plot": "SASDDN3_datloglog_img.png",
  "symmetry": null,
  "last_modified": "2023-06-21T07:56:39.492710+02:00",
  "bragg_peak": []
}

{
  "code": "SASDDN3",
  "status": "success",
  "started_at": "2026-08-11T14:03:56.758339+00:00",
  "finished_at": "2026-08-11T14:04:20.659396+00:00",
  "source_last_modified": "2023-06-21T07:56:39.492710+02:00",
  "files": [
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDDN3/",
      "path": "/data/saxsdb/sasbdb/entries/n3/sasddn3/source/summary.json",
      "size": 7412,
      "sha256": "1066e5d08a5bbd2cc18c569b8fa98034c48f7778438a488e209271bd0556eae8"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/intensities_files/SASDDN3.dat",
      "path": "/data/saxsdb/sasbdb/entries/n3/sasddn3/source/SASDDN3.dat",
      "size": 87145,
      "sha256": "a4dc38a2332cd5c7f1805453e89e6b01a408b06cd332a827ab69741480c905f4",
      "role": "curve"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/p_of_R_files/SASDDN3.out",
      "path": "/data/saxsdb/sasbdb/entries/n3/sasddn3/source/SASDDN3.out",
      "size": 117263,
      "sha256": "9e4b41c871bf14ea06d116f650262f96ae272162b663d2a384439977cd64cc54",
      "role": "pddf"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDDN3.sascif",
      "path": "/data/saxsdb/sasbdb/entries/n3/sasddn3/source/SASDDN3.sascif",
      "size": 168798,
      "sha256": "08bfd51d39e73b57a2624eb145616b13565da2ab46270fc0680e5db3e4a3d042",
      "role": "sascif"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/zip_directories/SASDDN3.zip",
      "path": "/data/saxsdb/sasbdb/entries/n3/sasddn3/source/SASDDN3.zip",
      "size": 7338376,
      "sha256": "7e1bb025ad0b9ab23d25aa776848b10b21356699a05f0055c29002569cbbf00b",
      "role": "full_entry_zip",
      "zip_member_count": 4,
      "zip_validation": "central_directory_readable"
    }
  ]
}