查看完整 summary.json 原文
{
"code": "SASDEA8",
"status": "Published",
"type_of_curve": "Merged",
"angular_unit": "1/A",
"project": {
"title": "Full length of DnaG primase from Bacillus subtilis",
"publication": null,
"status": "released",
"submitted_date": "2018-11-21",
"released_date": "2021-09-20"
},
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"name": "Shanghai Synchrotron Radiation Facility (SSRF)",
"city": "Shanghai",
"country": "China",
"beamline_name": "BL19U2",
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"type_of_source": "X-ray synchrotron",
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},
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"long_name": "DNA primase",
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"organism": "Bacillus subtilis",
"uniprot_code": "P05096",
"uniprot_range_first": null,
"uniprot_range_last": null,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "MGNRIPDEIVDQVQKSADIVEVIGDYVQLKKQGRNYFGLCPFHGESTPSFSVSPDKQIFH\nCFGCGAGGNVFSFLRQMEGYSFAESVSHLADKYQIDFPDDITVHSGARPESSGEQKMAEA\nHELLKKFYHHLLINTKEGQEALDYLLSRGFTKELINEFQIGYALDSWDFITKFLVKRGFS\nEAQMEKAGLLIRREDGSGYFDRFRNRVMFPIHDHHGAVVAFSGRALGSQQPKYMNSPETP\nLFHKSKLLYNFYKARLHIRKQERAVLFEGFADVISAVSSDVKESIATMGTSLTDDHVKIL\nRRNVEEIILCYDSDKAGYEATLKASELLQKKGCKVRVAMIPDGLDPDDYIKKFGGEKFKN\nDIIDASVTVMAFKMQYFRKGKNLSDEGDRLAYIKDVLKEISTLSGSLEQEVYVKQLASEF\nSLSQESLTEQLSVFSKQNKPADNSGETKTRRAHLTTKARQKRLRPAYENAERLLLAHMLR\nDRSVIKKVIDRVGFQFNIDEHRALAAYLYAFYEEGAELTPQHLMARVTDDHISQLLSDIL\nMLQVNQELSEAELSDYVKKVLNQRNWSMIKEKEAERAEAERQKDFLRAASLAQEIVTLNR\nSLK",
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"molecule_source": "biological",
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}
],
"buffer": {
"name": "25 mM Tris-HCl,100 mM NaCl",
"concentration_unit": null,
"comment": "25 mM Tris-HCl, pH 8.0, 100 mM NaCl, 1 mM DTT",
"additive": null,
"concentration": null,
"pka": null,
"ph": 8.0,
"deuteration": null
},
"purity_method": null,
"name": "Full length of DnaG (DNA Primase) from Bacillus subtilis",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": "Chengdu, China",
"full_name": "Chengdu Institute of Biology, Chinese academy of Sciences",
"webpage": "http://english.cib.cas.cn/"
}
],
"contributor_name": "Zhongchuan",
"contributor_surname": "Liu",
"orcid": null
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2018-10-01",
"storage_temperature": 10.0,
"cell_temperature": 10.0,
"exposure_time": 1.0,
"number_of_frames": 20,
"wavelength": 0.154,
"sample_detector_distance": 2.0,
"concentration_min": 1.0,
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"s_min": 0.084,
"s_max": 3.954,
"total_exposure_time": null,
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},
"fits": [
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{
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"software": "CORAL",
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"model_title": null,
"type_of_model": "mix",
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"software": "CORAL",
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"fit_residual_plot": "SASDEA8_fit1_fitresiduals_img.png",
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},
{
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"software": "DAMMIF",
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"model_data": "https://www.sasbdb.org/media/pdb_file/SASDEA8_fit2_model1.pdb",
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"bead_radius": 5.0,
"log": null,
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],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDEA8_fit2_fixed_fit_img.png",
"software": "DAMMIF",
"chi_square_value": 1.176,
"p_value": 0.050515,
"fit_residual_plot": "SASDEA8_fit2_fitresiduals_img.png",
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"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
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"description": null,
"experiment_description": "Synchrotron SAXS data from solutions of full length of DnaG (DNA Primase) from Bacillus subtilis in 25 mM Tris-HCl,100 mM NaCl, pH 8 were collected on the NCPSS BL19U2 beam line at the Shanghai Synchrotron Radiation Facility (SSRF; Shanghai, China) using a Dectris Pilatus 1M detector at a sample-detector distance of 2 m and at a wavelength of λ = 0.154 nm in the momentum transfer range of 0.2 < s < 4 1/nm (l(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). Solute concentrations ranging between 1 and 7 mg/ml were measured at 10°C. 20 successive 1 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted. The low angle data collected at lower concentration were merged with the highest concentration high angle data to yield the final composite scattering curve.",
"tags": [],
"intensity_unit": "arbitrary",
"experimental_mw": 70.0,
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"guinier_i0_mw": 70.0,
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"pddf_i0": 90.9,
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"guinier_i0": 89.22,
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"porod_volume": 119.0,
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"estimated_volume": null,
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"guinier_point_first": 7,
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"pddf_point_first": null,
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"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDEA8_datloglog_img.png",
"symmetry": null,
"last_modified": "2021-09-20T13:42:19.789088+02:00",
"bragg_peak": []
}
查看完整 manifest.json 原文
{
"code": "SASDEA8",
"status": "success",
"started_at": "2026-08-11T15:48:55.812994+00:00",
"finished_at": "2026-08-11T15:49:08.339581+00:00",
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