查看完整 summary.json 原文
{
"code": "SASDEB6",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/A",
"project": {
"title": "Functional and solution structure studies of amino sugar deacetylase and deaminase enzymes from Staphylococcus aureus.",
"publication": {
"title": "Functional and solution structure studies of amino sugar deacetylase and deaminase enzymes from Staphylococcus aureus.",
"author_list": "Davies JS, Coombes D, Horne CR, Pearce FG, Friemann R, North RA, Dobson RCJ",
"journal": "FEBS Lett",
"doi": "10.1002/1873-3468.13289",
"pmid": "30411345",
"published_date": "2018 Nov 9"
},
"status": "released",
"submitted_date": "2018-10-09",
"released_date": "2018-11-13"
},
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"name": "Australian Synchrotron",
"city": "Melbourne",
"country": "Australia",
"beamline_name": "SAXS/WAXS",
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"type_of_source": "X-ray synchrotron",
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"sample": {
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{
"long_name": "Glucosamine-6-phosphate deaminase",
"short_name": null,
"sequence": ">sp|A8YZR7|NAGB_STAAT Glucosamine-6-phosphate deaminase OS=Staphylococcus aureus (strain USA300 / TCH1516) OX=451516 GN=nagB PE=3 SV=1\r\nMKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN\r\nVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV\r\nLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA\r\nISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP\r\nKNVAKIHVDEMD",
"organism": "Staphylococcus aureus",
"uniprot_code": "A8YZR7",
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"oligomerization": "dimer",
"molecular_type": "protein",
"uniprot_sequence": "MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN\nVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV\nLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA\nISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP\nKNVAKIHVDEMD",
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"deuteration": null,
"molecule_source": "biological",
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}
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"comment": null,
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"pka": null,
"ph": 8.0,
"deuteration": null
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"purity_method": null,
"name": "Staphylococcus aureus glucosamine-6-phosphate deaminase",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": "New Zealand",
"full_name": "University of Canterbury",
"webpage": "https://www.canterbury.ac.nz/"
}
],
"contributor_name": "James",
"contributor_surname": "Davies",
"orcid": "https://orcid.org/0000-0003-4029-1650"
}
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"concentration_method": null,
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"date": "2016-04-26",
"storage_temperature": 4.0,
"cell_temperature": 20.0,
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"wavelength": 0.10332,
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"comment": "Dimeric structure taken from the E. coli hexameric glucosamine-6-phosphate deaminase.",
"user": 378
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"experiment_description": "Synchrotron SAXS data from solutions of Staphylococcus aureus glucosamine-6-phosphate deaminase in 20 mM Tris-HCl, 150 mM NaCl, pH 8 were collected on the SAXS/WAXS beam line at the Australian Synchrotron (Melbourne, Australia) using a Dectris Pilatus 1M detector at a sample-detector distance of 1.6 m and at a wavelength of λ = 0.10332 nm (l(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 6.00 mg/ml was measured at 20°C. 999 successive 1 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.",
"tags": [],
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"estimated_volume": null,
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"intensities_log_log_plot": "SASDEB6_datloglog_img.png",
"symmetry": null,
"last_modified": "2019-12-06T13:07:15.624532+01:00",
"bragg_peak": []
}
查看完整 manifest.json 原文
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