SASDET3

Armadillo repeat 7-11 from SAUL1

Data type: SASBDB experimental data Status: Published Curve type: Single concentration Last updated: 2023-06-21T07:56:39.492710+02:00

The rigid bodies used for the SASREF MX tetramer model were predicted by I-TASSER.

▼

1. Samples, Components and Experimental Conditions Sample & Experiment

Sample 1 · Armadillo repeat 7-11 from SAUL1

Concentration— – 2.0 Buffer / pH50 mM Tris, 250 mM NaCl / 9.0
Experimental temperature10.0 Facility / beamlinePETRA III / EMBL P12
Wavelength0.123987 nmExposure0.05 s × 20

Molecular Components

ComponentType / organismUniProt and ConstructOligomeric StateMolecular weight
U-box domain-containing protein 44
View sequence
ANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLGSLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALKHIDKIPNFSSIFPNIA
proteinArabidopsis thalianaQ9LM76382–801tetramerMolecule count 446.276 kDa

Experimental Curves

CurvePoints / columnsq rangeUncertainty qualityNegative-intensity pointsSource file
11808[3]0.0269502–4.80121 1/nmHas uncertainty columnMissing 0241sasbdb/entries/t3/sasdet3/source/SASDET3.dat
▼

2. Measurements Reported by SASBDB Reported Results

MetricMethodValueUncertaintyUnit
dmaxP(r)17.36—nm
i0Guinier8876.33——
i0P(r)8922.0——
mwExperimental161.0—kDa
mwPorod153.0—kDa
porod_volumePorod245.0—nm³
rgGuinier4.510.1nm
rgP(r)4.636—nm

These values are reported by SASBDB; SAXSdb did not recalculate them from the experimental curve.

▼

3. Source Fits and Models Source Fits & Models

Fit 1 · CRYSOL

χ²: 1.047CorMap p: 0.043626Unit: 1/A
ModelName / TypeSoftwareSymmetryModel MWPDB DeclarationSource file
1—atomicSASREF MX P222183.4—Model Image
▶

4. Source File Index Source Files

▶

5. Experiment Description and Publication Experiment & Publication

▼

6. Complete Source Record Complete Source Record

The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.

Open the original SASBDB entry

Buffer and Sample Properties

Buffer name50 mM Tris, 250 mM NaClBuffer concentration—
pH9.0Additives—
Buffer description—
Purity measurement method—Extinction coefficient—
Absorbance—Scattering contrast—
Specific volume / dry volume— / —Mixture / deuteration— / —

Acquisition Conditions and Instrument

Measurement date2015-06-02Storage / measurement temperature10.0 / 10.0
Exposure time0.05Frames20
Wavelength0.123987Sample-to-detector distance3.0
SourceX-ray synchrotronDetectorPilatus 2M
Facility / beamlinePETRA III / EMBL P12 · DESY; Hamburg, Germany
q range0.027 – 4.801Sample volume / flow rate— / —

Original SASBDB Plots

Experimental I(q)
Experimental I(q)
Experimental I(q), log-log
Experimental I(q), log-log
Guinier plot
Guinier plot
Kratky plot
Kratky plot
P(r) plot
P(r) plot

Downloadable Files

CategoryFileStatusSizeChecksumDownload and View
curvesasbdb/entries/t3/sasdet3/source/SASDET3.datdownloaded8296242fadf3d1212d0a77899614b4c9d926bb7a5f00b1598771a1336cf1044428288DownloadView source fileSource site
full_entry_zipsasbdb/entries/t3/sasdet3/source/SASDET3.zipdownloaded275229dbf32e35e1c4272ffc21eda86d04d9829855342c2d728f238354a96670677c9dDownloadView source fileSource site
pddfsasbdb/entries/t3/sasdet3/source/SASDET3.outdownloaded60624e4fa309c982cbc754ba78d08b48d4c2adb5f6a7fc871d49246157a08021c9530DownloadView source fileSource site
sascifsasbdb/entries/t3/sasdet3/source/SASDET3.sascifdownloaded15242640e4f7202c0b96ca6d9ec002d7a7f96adfe7ef28844b77a5c19b50ddc6e16c128DownloadView source fileSource site
summarysasbdb/entries/t3/sasdet3/source/summary.jsondownloaded7666ab0d0ef56113449e6a8f288fe9326490dd87f30ad0ad4e922abd3be8a90addfbDownloadView source fileSource site
curve:source record
{
  "path": "/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.dat",
  "role": "curve",
  "sha256": "42fadf3d1212d0a77899614b4c9d926bb7a5f00b1598771a1336cf1044428288",
  "size": 82962,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/intensities_files/SASDET3.dat"
}
full_entry_zip:source record and ZIP contents (4 items)
{
  "path": "/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.zip",
  "role": "full_entry_zip",
  "sha256": "dbf32e35e1c4272ffc21eda86d04d9829855342c2d728f238354a96670677c9d",
  "size": 275229,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/zip_directories/SASDET3.zip",
  "zip_member_count": 4,
  "zip_members": [
    {
      "crc32": "714c0843",
      "name": "SASDET3/experimental_data/SASDET3.dat",
      "size": 82962
    },
    {
      "crc32": "2828e3c9",
      "name": "SASDET3/pddf/SASDET3.out",
      "size": 60624
    },
    {
      "crc32": "624bb77e",
      "name": "SASDET3/SASDET3_fit1.fit",
      "size": 84086
    },
    {
      "crc32": "cb12b598",
      "name": "SASDET3/SASDET3_fit1_model1.pdb",
      "size": 863885
    }
  ],
  "zip_validation": "central_directory_readable"
}
pddf:source record
{
  "path": "/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.out",
  "role": "pddf",
  "sha256": "e4fa309c982cbc754ba78d08b48d4c2adb5f6a7fc871d49246157a08021c9530",
  "size": 60624,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/p_of_R_files/SASDET3.out"
}
sascif:source record
{
  "path": "/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.sascif",
  "role": "sascif",
  "sha256": "0e4f7202c0b96ca6d9ec002d7a7f96adfe7ef28844b77a5c19b50ddc6e16c128",
  "size": 1524264,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDET3.sascif"
}
summary:source record
{
  "path": "/data/saxsdb/sasbdb/entries/t3/sasdet3/source/summary.json",
  "sha256": "ab0d0ef56113449e6a8f288fe9326490dd87f30ad0ad4e922abd3be8a90addfb",
  "size": 7666,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDET3/"
}

All source fields (unfiltered)

Every source field is expanded here, including empty values, list members and fields already shown above.

summary.json:158 field values
Field pathRaw value
codeSASDET3
statusPublished
type_of_curveSingle concentration
angular_unit1/nm
project.titleSenescence-associated ubiquitin ligase 1 (SAUL1)
project.publicationnull
project.statusreleased
project.submitted_date2017-07-21
project.released_date2021-09-13
pddf_datahttps://www.sasbdb.org/media/p_of_R_files/SASDET3.out
intensities_datahttps://www.sasbdb.org/media/intensities_files/SASDET3.dat
intensities_log_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDET3_dat_img.png
intensities_kratky_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDET3_kratky_img.png
pddf_plothttps://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDET3_pofr_img.png
intensities_guinier_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDET3_guinier_img.png
sascif_datahttps://www.sasbdb.org/media/sascif/sascif_files/SASDET3.sascif
experiment.instrument.detector.typenull
experiment.instrument.detector.namePilatus 2M
experiment.instrument.detector.resolutionnull
experiment.instrument.namePETRA III
experiment.instrument.cityDESY; Hamburg
experiment.instrument.countryGermany
experiment.instrument.beamline_nameEMBL P12
experiment.instrument.beam_geometrynull
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
experiment.instrument.line_collimation_slitlengthnull
experiment.instrument.line_collimation_integrationwidthnull
experiment.instrument.xray_energynull
experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameU-box domain-containing protein 44
experiment.sample.molecule[0].short_nameARM
experiment.sample.molecule[0].sequenceANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPKVVYAI KTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLGSLVAIISE KTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKGMRFVNPFLE GLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALENLSLESIK LTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETFCLVEGGAVEKLVALLDHE NVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTERLTRRAVWMVERI LRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALKHIDKIPNFSSIFPNIA
experiment.sample.molecule[0].organismArabidopsis thaliana
experiment.sample.molecule[0].uniprot_codeQ9LM76
experiment.sample.molecule[0].uniprot_range_first382
experiment.sample.molecule[0].uniprot_range_last801
experiment.sample.molecule[0].oligomerizationtetramer
experiment.sample.molecule[0].molecular_typeprotein
experiment.sample.molecule[0].uniprot_sequenceMVGSSDGDQSDDSSHFERGVDHIYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKEC RDSGRPPSCPLTSQELTSTDVSASIALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDIL QALMHVRQICRTIRSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKA IVAEGDTVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSN SENVSIVEKADRTLENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPL NNDVKVLVAQTVGSSLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKD LFYVGPNNLPIRLKEVSATILANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKL LEVLVGLTSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEE LAKALCGTAGQLGSLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKII SKVFGIRQGDIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQS NGQDNIQMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGIC SLRETFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIR HILNVLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIA ENALKHIDKIPNFSSIFPNIA
experiment.sample.molecule[0].mw46.276
experiment.sample.molecule[0].total_mw185.104
experiment.sample.molecule[0].number_molecules4
experiment.sample.molecule[0].complex_stateFalse
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionnull
experiment.sample.buffer.name50 mM Tris, 250 mM NaCl
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph9.0
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameArmadillo repeat 7-11 from SAUL1
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_namenull
experiment.contributor[0].affiliation[0].addressHamburg, Germany
experiment.contributor[0].affiliation[0].full_nameUniversity of Hamburg
experiment.contributor[0].affiliation[0].webpagehttps://www.uni-hamburg.de/
experiment.contributor[0].contributor_nameHaifa
experiment.contributor[0].contributor_surnameEl Kilani
experiment.contributor[0].orcidnull
experiment.contributor[1].affiliation[0].short_nameEMBL-Hamburg
experiment.contributor[1].affiliation[0].addressNotkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany
experiment.contributor[1].affiliation[0].full_nameEuropean Molecular Biology Laboratory (EMBL) - Hamburg outstation
experiment.contributor[1].affiliation[0].webpagehttp://www.embl-hamburg.de/index.php
experiment.contributor[1].contributor_nameAl
experiment.contributor[1].contributor_surnameKikhney
experiment.contributor[1].orcidhttps://orcid.org/0000-0003-1321-3956
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2015-06-02
experiment.storage_temperature10.0
experiment.cell_temperature10.0
experiment.exposure_time0.05
experiment.number_of_frames20
experiment.wavelength0.123987
experiment.sample_detector_distance3.0
experiment.concentration_minnull
experiment.concentration_max2.0
experiment.sample_volumenull
experiment.flow_ratenull
experiment.s_min0.027
experiment.s_max4.801
experiment.total_exposure_timenull
experiment.seccolumnnull
fits[0].models[0].model_plothttps://www.sasbdb.org/media/pdb_file/images/SASDET3_fit1_model1_img.png
fits[0].models[0].softwareSASREF MX
fits[0].models[0].pdb_link[]
fits[0].models[0].model_titlenull
fits[0].models[0].type_of_modelatomic
fits[0].models[0].software_version
fits[0].models[0].model_datahttps://www.sasbdb.org/media/pdb_file/SASDET3_fit1_model1.pdb
fits[0].models[0].model_mw183.4
fits[0].models[0].bead_radius1.9
fits[0].models[0].lognull
fits[0].models[0].symmetryP222
fits[0].models[0].comment
fits[0].models[0].user4
fits[0].fit_unit1/A
fits[0].fit_plothttps://www.sasbdb.org/media/fitting_files/scattering_plots/SASDET3_fit1_fixed_fit_img.png
fits[0].softwareCRYSOL
fits[0].chi_square_value1.047
fits[0].p_value0.043626
fits[0].fit_residual_plotSASDET3_fit1_fitresiduals_img.png
fits[0].fit_datahttps://www.sasbdb.org/media/fitting_files/SASDET3_fit1.fit
fits[0].fit_lognull
fits[0].software_version
fits[0].descriptionnull
estimated_volume_methodnull
pddf_softwareATSAS GNOM
pddf_software_version5.0 r8517
i0_calibration_standardnull
descriptionThe rigid bodies used for the SASREF MX tetramer model were predicted by I-TASSER.
experiment_descriptionnull
tags[]
intensity_unitnull
experimental_mw161.0
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mw153.0
porod_mw_errornull
pddf_i08922.0
pddf_i0_errornull
guinier_i08876.33
guinier_i0_errornull
pddf_rg4.636
pddf_rg_errornull
guinier_rg4.51
guinier_rg_error0.1
pddf_dmax17.36
pddf_dmax_errornull
porod_volume245.0
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first30
guinier_point_last93
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDET3_datloglog_img.png
symmetrynull
last_modified2023-06-21T07:56:39.492710+02:00
bragg_peak[]
manifest.json:36 field values
Field pathRaw value
codeSASDET3
statussuccess
started_at2026-08-11T16:44:58.635697+00:00
finished_at2026-08-11T16:45:11.472196+00:00
source_last_modified2023-06-21T07:56:39.492710+02:00
files[0].statusdownloaded
files[0].urlhttps://www.sasbdb.org/rest-api/entry/summary/SASDET3/
files[0].path/data/saxsdb/sasbdb/entries/t3/sasdet3/source/summary.json
files[0].size7666
files[0].sha256ab0d0ef56113449e6a8f288fe9326490dd87f30ad0ad4e922abd3be8a90addfb
files[1].statusdownloaded
files[1].urlhttps://www.sasbdb.org/media/intensities_files/SASDET3.dat
files[1].path/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.dat
files[1].size82962
files[1].sha25642fadf3d1212d0a77899614b4c9d926bb7a5f00b1598771a1336cf1044428288
files[1].rolecurve
files[2].statusdownloaded
files[2].urlhttps://www.sasbdb.org/media/p_of_R_files/SASDET3.out
files[2].path/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.out
files[2].size60624
files[2].sha256e4fa309c982cbc754ba78d08b48d4c2adb5f6a7fc871d49246157a08021c9530
files[2].rolepddf
files[3].statusdownloaded
files[3].urlhttps://www.sasbdb.org/media/sascif/sascif_files/SASDET3.sascif
files[3].path/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.sascif
files[3].size1524264
files[3].sha2560e4f7202c0b96ca6d9ec002d7a7f96adfe7ef28844b77a5c19b50ddc6e16c128
files[3].rolesascif
files[4].statusdownloaded
files[4].urlhttps://www.sasbdb.org/media/zip_directories/SASDET3.zip
files[4].path/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.zip
files[4].size275229
files[4].sha256dbf32e35e1c4272ffc21eda86d04d9829855342c2d728f238354a96670677c9d
files[4].rolefull_entry_zip
files[4].zip_member_count4
files[4].zip_validationcentral_directory_readable
View the complete summary.json source
{
  "code": "SASDET3",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/nm",
  "project": {
    "title": "Senescence-associated ubiquitin ligase 1 (SAUL1)",
    "publication": null,
    "status": "released",
    "submitted_date": "2017-07-21",
    "released_date": "2021-09-13"
  },
  "pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDET3.out",
  "intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDET3.dat",
  "intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDET3_dat_img.png",
  "intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDET3_kratky_img.png",
  "pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDET3_pofr_img.png",
  "intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDET3_guinier_img.png",
  "sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDET3.sascif",
  "experiment": {
    "instrument": {
      "detector": {
        "type": null,
        "name": "Pilatus 2M",
        "resolution": null
      },
      "name": "PETRA III",
      "city": "DESY; Hamburg",
      "country": "Germany",
      "beamline_name": "EMBL P12",
      "beam_geometry": null,
      "type_of_source": "X-ray synchrotron",
      "point_source": null,
      "line_collimation": null,
      "sample_path_length": null,
      "line_collimation_slitlength": null,
      "line_collimation_integrationwidth": null,
      "xray_energy": null,
      "beam_profile_ah": null,
      "beam_profile_al": null
    },
    "sample": {
      "molecule": [
        {
          "long_name": "U-box domain-containing protein 44",
          "short_name": "ARM",
          "sequence": "ANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPKVVYAI\r\nKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLGSLVAIISE\r\nKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKGMRFVNPFLE\r\nGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALENLSLESIK\r\nLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETFCLVEGGAVEKLVALLDHE\r\nNVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTERLTRRAVWMVERI\r\nLRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALKHIDKIPNFSSIFPNIA",
          "organism": "Arabidopsis thaliana",
          "uniprot_code": "Q9LM76",
          "uniprot_range_first": 382,
          "uniprot_range_last": 801,
          "oligomerization": "tetramer",
          "molecular_type": "protein",
          "uniprot_sequence": "MVGSSDGDQSDDSSHFERGVDHIYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKEC\nRDSGRPPSCPLTSQELTSTDVSASIALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDIL\nQALMHVRQICRTIRSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKA\nIVAEGDTVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSN\nSENVSIVEKADRTLENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPL\nNNDVKVLVAQTVGSSLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKD\nLFYVGPNNLPIRLKEVSATILANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKL\nLEVLVGLTSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEE\nLAKALCGTAGQLGSLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKII\nSKVFGIRQGDIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQS\nNGQDNIQMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGIC\nSLRETFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIR\nHILNVLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIA\nENALKHIDKIPNFSSIFPNIA",
          "mw": 46.276,
          "total_mw": 185.104,
          "number_molecules": 4,
          "complex_state": false,
          "deuteration": null,
          "molecule_source": "biological",
          "molecule_description": null
        }
      ],
      "buffer": {
        "name": "50 mM Tris, 250 mM NaCl",
        "concentration_unit": null,
        "comment": null,
        "additive": null,
        "concentration": null,
        "pka": null,
        "ph": 9.0,
        "deuteration": null
      },
      "purity_method": null,
      "name": "Armadillo repeat 7-11 from SAUL1",
      "ext_coefficient": null,
      "contrast": null,
      "specific_vol": null,
      "dry_vol": null,
      "absorbption": null,
      "deuteration": null,
      "mixture": null
    },
    "contributor": [
      {
        "affiliation": [
          {
            "short_name": null,
            "address": "Hamburg, Germany",
            "full_name": "University of Hamburg",
            "webpage": "https://www.uni-hamburg.de/"
          }
        ],
        "contributor_name": "Haifa",
        "contributor_surname": "El Kilani",
        "orcid": null
      },
      {
        "affiliation": [
          {
            "short_name": "EMBL-Hamburg",
            "address": "Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany",
            "full_name": "European Molecular Biology Laboratory (EMBL) - Hamburg outstation",
            "webpage": "http://www.embl-hamburg.de/index.php"
          }
        ],
        "contributor_name": "Al",
        "contributor_surname": "Kikhney",
        "orcid": "https://orcid.org/0000-0003-1321-3956"
      }
    ],
    "concentration_method": null,
    "concentration_unit": null,
    "date": "2015-06-02",
    "storage_temperature": 10.0,
    "cell_temperature": 10.0,
    "exposure_time": 0.05,
    "number_of_frames": 20,
    "wavelength": 0.123987,
    "sample_detector_distance": 3.0,
    "concentration_min": null,
    "concentration_max": 2.0,
    "sample_volume": null,
    "flow_rate": null,
    "s_min": 0.027,
    "s_max": 4.801,
    "total_exposure_time": null,
    "seccolumn": null
  },
  "fits": [
    {
      "models": [
        {
          "model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDET3_fit1_model1_img.png",
          "software": "SASREF MX",
          "pdb_link": [],
          "model_title": null,
          "type_of_model": "atomic",
          "software_version": "",
          "model_data": "https://www.sasbdb.org/media/pdb_file/SASDET3_fit1_model1.pdb",
          "model_mw": 183.4,
          "bead_radius": 1.9,
          "log": null,
          "symmetry": "P222",
          "comment": "",
          "user": 4
        }
      ],
      "fit_unit": "1/A",
      "fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDET3_fit1_fixed_fit_img.png",
      "software": "CRYSOL",
      "chi_square_value": 1.047,
      "p_value": 0.043626,
      "fit_residual_plot": "SASDET3_fit1_fitresiduals_img.png",
      "fit_data": "https://www.sasbdb.org/media/fitting_files/SASDET3_fit1.fit",
      "fit_log": null,
      "software_version": "",
      "description": null
    }
  ],
  "estimated_volume_method": null,
  "pddf_software": "ATSAS GNOM",
  "pddf_software_version": "5.0 r8517",
  "i0_calibration_standard": null,
  "description": "The rigid bodies used for the SASREF MX tetramer model were predicted by I-TASSER.",
  "experiment_description": null,
  "tags": [],
  "intensity_unit": null,
  "experimental_mw": 161.0,
  "experimental_mw_error": null,
  "guinier_i0_mw": null,
  "guinier_i0_mw_error": null,
  "porod_mw": 153.0,
  "porod_mw_error": null,
  "pddf_i0": 8922.0,
  "pddf_i0_error": null,
  "guinier_i0": 8876.33,
  "guinier_i0_error": null,
  "pddf_rg": 4.636,
  "pddf_rg_error": null,
  "guinier_rg": 4.51,
  "guinier_rg_error": 0.1,
  "pddf_dmax": 17.36,
  "pddf_dmax_error": null,
  "porod_volume": 245.0,
  "porod_volume_error": null,
  "estimated_volume": null,
  "estimated_volume_error": null,
  "guinier_point_first": 30,
  "guinier_point_last": 93,
  "pddf_point_first": null,
  "pddf_point_last": null,
  "i0_calibration_standard_data": null,
  "intensities_log_log_plot": "SASDET3_datloglog_img.png",
  "symmetry": null,
  "last_modified": "2023-06-21T07:56:39.492710+02:00",
  "bragg_peak": []
}
View the complete manifest.json source
{
  "code": "SASDET3",
  "status": "success",
  "started_at": "2026-08-11T16:44:58.635697+00:00",
  "finished_at": "2026-08-11T16:45:11.472196+00:00",
  "source_last_modified": "2023-06-21T07:56:39.492710+02:00",
  "files": [
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDET3/",
      "path": "/data/saxsdb/sasbdb/entries/t3/sasdet3/source/summary.json",
      "size": 7666,
      "sha256": "ab0d0ef56113449e6a8f288fe9326490dd87f30ad0ad4e922abd3be8a90addfb"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/intensities_files/SASDET3.dat",
      "path": "/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.dat",
      "size": 82962,
      "sha256": "42fadf3d1212d0a77899614b4c9d926bb7a5f00b1598771a1336cf1044428288",
      "role": "curve"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/p_of_R_files/SASDET3.out",
      "path": "/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.out",
      "size": 60624,
      "sha256": "e4fa309c982cbc754ba78d08b48d4c2adb5f6a7fc871d49246157a08021c9530",
      "role": "pddf"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDET3.sascif",
      "path": "/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.sascif",
      "size": 1524264,
      "sha256": "0e4f7202c0b96ca6d9ec002d7a7f96adfe7ef28844b77a5c19b50ddc6e16c128",
      "role": "sascif"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/zip_directories/SASDET3.zip",
      "path": "/data/saxsdb/sasbdb/entries/t3/sasdet3/source/SASDET3.zip",
      "size": 275229,
      "sha256": "dbf32e35e1c4272ffc21eda86d04d9829855342c2d728f238354a96670677c9d",
      "role": "full_entry_zip",
      "zip_member_count": 4,
      "zip_validation": "central_directory_readable"
    }
  ]
}