The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.
Open the original SASBDB entry
Buffer and Sample Properties
Acquisition Conditions and Instrument
Original SASBDB Plots
Experimental I(q)
Experimental I(q), log-log
Guinier plot
Kratky plot
P(r) plot
Downloadable Files
curve:source record
{
"path": "/data/saxsdb/sasbdb/entries/76/sasdf76/source/SASDF76.dat",
"role": "curve",
"sha256": "e9daa02e4a0c214dc10e1904637edc69caed2c9ff16ca573d076645eda8c9d09",
"size": 76498,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDF76.dat"
}full_entry_zip:source record and ZIP contents (4 items)
{
"path": "/data/saxsdb/sasbdb/entries/76/sasdf76/source/SASDF76.zip",
"role": "full_entry_zip",
"sha256": "84cf6f6757721f5d77a1257b089703083ddc6cf44212e6a5b01784032a7a4017",
"size": 146029,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDF76.zip",
"zip_member_count": 4,
"zip_members": [
{
"crc32": "28cf348e",
"name": "SASDF76/experimental_data/SASDF76.dat",
"size": 76498
},
{
"crc32": "8b27886e",
"name": "SASDF76/pddf/SASDF76.out",
"size": 95657
},
{
"crc32": "db3b8564",
"name": "SASDF76/SASDF76_fit1.fit",
"size": 91516
},
{
"crc32": "9575c7e5",
"name": "SASDF76/SASDF76_fit1_model1.pdb",
"size": 308638
}
],
"zip_validation": "central_directory_readable"
}pddf:source record
{
"path": "/data/saxsdb/sasbdb/entries/76/sasdf76/source/SASDF76.out",
"role": "pddf",
"sha256": "1737f804d382d3876f7bf1badf2be292fc1d43416ad142aea552074130fcd443",
"size": 95657,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDF76.out"
}sascif:source record
{
"path": "/data/saxsdb/sasbdb/entries/76/sasdf76/source/SASDF76.sascif",
"role": "sascif",
"sha256": "c2d02d39c205dd04dc776629c791fb9360d286deca411219e91217e5c9c75180",
"size": 697353,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDF76.sascif"
}summary:source record
{
"path": "/data/saxsdb/sasbdb/entries/76/sasdf76/source/summary.json",
"sha256": "3e61035b293f226677b075d6913873d2708c7e758ebee5dde852977dc302e879",
"size": 7191,
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDF76/"
}
All source fields (unfiltered)
Every source field is expanded here, including empty values, list members and fields already shown above.
summary.json:156 field values
manifest.json:36 field values
View the complete summary.json source
{
"code": "SASDF76",
"status": "Published",
"type_of_curve": "Merged",
"angular_unit": "1/nm",
"project": {
"title": "Structural and biochemical analysis of a phosin from Streptomyces chartreusis reveals a combined polyphosphate- and metal-binding fold.",
"publication": {
"title": "Structural and biochemical analysis of a phosin from Streptomyces chartreusis reveals a combined polyphosphate- and metal-binding fold.",
"author_list": "Werten S, Rustmeier NH, Gemmer M, Virolle MJ, Hinrichs W",
"journal": "FEBS Lett",
"doi": "10.1002/1873-3468.13476",
"pmid": "31183865",
"published_date": "2019 Jun 10"
},
"status": "released",
"submitted_date": "2019-04-30",
"released_date": "2019-06-11"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDF76.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDF76.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDF76_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDF76_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDF76_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDF76_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDF76.sascif",
"experiment": {
"instrument": {
"detector": {
"type": null,
"name": "Pilatus 2M",
"resolution": null
},
"name": "PETRA III",
"city": "DESY; Hamburg",
"country": "Germany",
"beamline_name": "EMBL P12",
"beam_geometry": null,
"type_of_source": "X-ray synchrotron",
"point_source": null,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "Polyphosphate-targeting protein A",
"short_name": "PptA",
"sequence": "GHMAQRHLDPTDPLAGPSPTGDTLAGYLRAQATEFLRALRLHRETGSGANGAEGPVEAARAL\r\nRRSARRISATLHTFQSLLDTDWCEGMRPELAWVSGTLAMEHAYTARLERLLNALHRLSGS\r\nTALPSQTADSAAGGRAAGAAPVPRTAAPRDAGLRTPPTSTTERGNLTVGAAKAGALLDRQ\r\nLTLARTRAHSTALQAMGSSRFHAIADKVAVLASEVPLTPAAATADLRPLATAAKDRLTDA\r\nVAALPLITAGHPYNAAALIHGLSPDTVPHPQDAPWHQVRLLLRLHRYAREAVSGPKGNAV\r\nVDLRLLSAGQALNRHRDASEAAAAAAQAARTPRIAPATAYALGVLHADQRHEVEAARFAF\r\nQQAWQKEAEAVSTR",
"organism": "Streptomyces chartreusis",
"uniprot_code": "A0A2N9BBV4",
"uniprot_range_first": 1,
"uniprot_range_last": 374,
"oligomerization": "dimer",
"molecular_type": "protein",
"uniprot_sequence": "MAQRHLDPTDPLAGPSPTGDTLAGYLRAQATEFLRALRLHRETGSGANGAEGPVEAARAL\nRRSARRISATLHTFQSLLDTDWCEGMRPELAWVSGTLAMEHAYTARLERLLNALHRLSGS\nTALPSQTADSAAGGRAAGAAPVPRTAAPRDAGLRTPPTSTTERGNLTVGAAKAGALLDRQ\nLTLARTRAHSTALQAMGSSRFHAIADKVAVLASEVPLTPAAATADLRPLATAAKDRLTDA\nVAALPLITAGHPYNAAALIHGLSPDTVPHPQDAPWHQVRLLLRLHRYAREAVSGPKGNAV\nVDLRLLSAGQALNRHRDASEAAAAAAQAARTPRIAPATAYALGVLHADQRHEVEAARFAF\nQQAWQKEAEAVSTR",
"mw": 39.59,
"total_mw": 79.18,
"number_molecules": 2,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": null
}
],
"buffer": {
"name": "20 mM Tris-HCl 400 mM NaCl",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.4,
"deuteration": null
},
"purity_method": null,
"name": "Polyphosphate-targeting protein A",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": "Innsbruck, Austria",
"full_name": "Medical University of Innsbruck",
"webpage": "https://www.i-med.ac.at/"
}
],
"contributor_name": "Sebastiaan",
"contributor_surname": "Werten",
"orcid": "https://orcid.org/0000-0003-2244-9688"
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2016-11-24",
"storage_temperature": null,
"cell_temperature": 10.0,
"exposure_time": 0.05,
"number_of_frames": 20,
"wavelength": 0.124,
"sample_detector_distance": 3.1,
"concentration_min": 1.31,
"concentration_max": 5.48,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.033,
"s_max": 3.498,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [
{
"models": [
{
"model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDF76_fit1_model1_img.png",
"software": "CORAL",
"pdb_link": [],
"model_title": null,
"type_of_model": "mix",
"software_version": null,
"model_data": "https://www.sasbdb.org/media/pdb_file/SASDF76_fit1_model1.pdb",
"model_mw": 81.9,
"bead_radius": 1.9,
"log": "https://www.sasbdb.org/media/log_files/Dimer.log",
"symmetry": "p2",
"comment": null,
"user": 438
}
],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/Dimer-1_fixed_fit_img.png",
"software": "CORAL",
"chi_square_value": 1.06,
"p_value": 0.555714,
"fit_residual_plot": "Dimer-1_fitresiduals_img.png",
"fit_data": "https://www.sasbdb.org/media/fitting_files/SASDF76_fit1.fit",
"fit_log": "https://www.sasbdb.org/media/fitting_files/log_files/Dimer.log",
"software_version": "1.1",
"description": ""
}
],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": "5.0",
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [],
"intensity_unit": "arbitrary",
"experimental_mw": 78.5,
"experimental_mw_error": null,
"guinier_i0_mw": 58.8,
"guinier_i0_mw_error": null,
"porod_mw": 77.3,
"porod_mw_error": null,
"pddf_i0": 4523.0,
"pddf_i0_error": null,
"guinier_i0": 4530.06,
"guinier_i0_error": 11.91,
"pddf_rg": 3.536,
"pddf_rg_error": null,
"guinier_rg": 3.51,
"guinier_rg_error": 0.28,
"pddf_dmax": 11.84,
"pddf_dmax_error": null,
"porod_volume": 123.74,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 23,
"guinier_point_last": 162,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDF76_datloglog_img.png",
"symmetry": null,
"last_modified": "2023-06-21T07:56:39.492710+02:00",
"bragg_peak": []
}
View the complete manifest.json source
{
"code": "SASDF76",
"status": "success",
"started_at": "2026-08-11T15:03:09.045020+00:00",
"finished_at": "2026-08-11T15:03:18.478691+00:00",
"source_last_modified": "2023-06-21T07:56:39.492710+02:00",
"files": [
{
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDF76/",
"path": "/data/saxsdb/sasbdb/entries/76/sasdf76/source/summary.json",
"size": 7191,
"sha256": "3e61035b293f226677b075d6913873d2708c7e758ebee5dde852977dc302e879"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDF76.dat",
"path": "/data/saxsdb/sasbdb/entries/76/sasdf76/source/SASDF76.dat",
"size": 76498,
"sha256": "e9daa02e4a0c214dc10e1904637edc69caed2c9ff16ca573d076645eda8c9d09",
"role": "curve"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDF76.out",
"path": "/data/saxsdb/sasbdb/entries/76/sasdf76/source/SASDF76.out",
"size": 95657,
"sha256": "1737f804d382d3876f7bf1badf2be292fc1d43416ad142aea552074130fcd443",
"role": "pddf"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDF76.sascif",
"path": "/data/saxsdb/sasbdb/entries/76/sasdf76/source/SASDF76.sascif",
"size": 697353,
"sha256": "c2d02d39c205dd04dc776629c791fb9360d286deca411219e91217e5c9c75180",
"role": "sascif"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDF76.zip",
"path": "/data/saxsdb/sasbdb/entries/76/sasdf76/source/SASDF76.zip",
"size": 146029,
"sha256": "84cf6f6757721f5d77a1257b089703083ddc6cf44212e6a5b01784032a7a4017",
"role": "full_entry_zip",
"zip_member_count": 4,
"zip_validation": "central_directory_readable"
}
]
}