SASDF86

Human Galectin-10 (Tyr69Glu mutant)

数据类型:SASBDB 实验数据 状态:Published 曲线类型:SEC-SAS 最后更新:2019-12-06T13:07:15.624532+01:00
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1. 样品、组分与实验条件 Sample & Experiment

样品 1 · Human Galectin-10 (Tyr69Glu mutant)

浓度— – 20.0 缓冲液 / pH20 mM Hepes 150 NaCl / 7.4
实验温度15.0 设备 / 束线SOLEIL / SWING
波长0.103 nm曝光1.0 s × 14

分子组分

组分类型 / 物种UniProt 与构建体寡聚状态分子量
Galectin-10 Tyr69Glu
查看序列
GHMSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGRRVVMNSREEGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISLTKFNVSYLKR
proteinHomo sapiensQ05315—–—dimer分子数 216.613 kDa

实验曲线

曲线点数 / 列q 范围误差质量负强度点来源文件
11194[3]0.00658806991112–0.608870553646 1/A含误差列缺失 00sasbdb/entries/86/sasdf86/source/SASDF86.dat
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2. SASBDB 报告的指标 Reported Results

指标方法数值误差单位
dmaxP(r)8.15—Å
i0Guinier0.120254—arbitrary
mwExperimental30.2—kDa
mwPorod28.7—kDa
porod_volumePorod46.0—ų
rgGuinier2.1470.01Å
rgP(r)2.172—Å

这些数值是 SASBDB 来源记录,不是 SAXSdb 对实验曲线重新计算的结果。

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3. 来源拟合与模型 Source Fits & Models

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4. 来源文件索引 Source Files

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5. 实验说明与论文 Experiment & Publication

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6. 完整来源记录 Complete Source Record

下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;未声明的单位不会由 SAXSdb 猜测。

打开 SASBDB 原始条目

缓冲液与样品属性

缓冲液名称20 mM Hepes 150 NaCl缓冲液浓度—
pH7.4添加剂—
缓冲液说明—
纯度测定方法—消光系数—
吸收值—散射对比度—
比体积 / 干体积— / —混合物 / 氘代— / —

采集条件与仪器

测量日期2018-02-04储存 / 测量温度— / 15.0
曝光时间1.0帧数14
波长0.103样品-探测器距离1.8
光源X-ray synchrotron探测器Eiger 4M
机构 / 束线SOLEIL / SWING · Saint-Aubin, France
q 范围0.066 – 6.089样品体积 / 流速50.0 / 0.3

SASBDB 原始图

实验 I(q)
实验 I(q)
实验 I(q) log-log
实验 I(q) log-log
Guinier 图
Guinier 图
Kratky 图
Kratky 图
P(r) 图
P(r) 图

可下载文件

类别文件状态大小校验值下载与查看
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full_entry_zipsasbdb/entries/86/sasdf86/source/SASDF86.zipdownloaded147088f7971e3486e21726bfff4e819ba5a6f7e5138ef2ed597fcafafe9f3fc55c6ad1下载查看原文件源站
pddfsasbdb/entries/86/sasdf86/source/SASDF86.outdownloaded3901013a3025ca2342e334890fcb828b40a7c332e6ea534bcd06a9f8c4c694e656790下载查看原文件源站
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curve:来源记录
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full_entry_zip:来源记录与 ZIP 内部目录(4 项)
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pddf:来源记录
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sascif:来源记录
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summary:来源记录
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全部来源字段(无筛选)

这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。

summary.json:166 个字段值
字段路径原始值
codeSASDF86
statusPublished
type_of_curveSEC-SAS
angular_unit1/A
project.titleProtein crystallization promotes type 2 immunity and is reversible by antibody treatment.
project.publication.titleProtein crystallization promotes type 2 immunity and is reversible by antibody treatment.
project.publication.author_listPersson EK, Verstraete K, Heyndrickx I, Gevaert E, Aegerter H, Percier JM, Deswarte K, Verschueren KHG, Dansercoer A, Gras D, Chanez P, Bachert C, Gonçalves A, Van Gorp H, De Haard H, Blanchetot C, Saunders M, Hammad H, Savvides SN, Lambrecht BN
project.publication.journalScience
project.publication.doi10.1126/science.aaw4295
project.publication.pmid31123109
project.publication.published_date2019 May 24
project.statusreleased
project.submitted_date2019-05-10
project.released_date2019-09-13
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experiment.instrument.countryFrance
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experiment.sample.molecule[0].long_nameGalectin-10 Tyr69Glu
experiment.sample.molecule[0].short_nameGal-10
experiment.sample.molecule[0].sequenceGHMSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGRRVVMNSREEGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISLTKFNVSYLKR
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experiment.sample.molecule[0].total_mw33.226
experiment.sample.molecule[0].number_molecules2
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experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph7.4
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameHuman Galectin-10 (Tyr69Glu mutant)
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_nameEMBL-Hamburg
experiment.contributor[0].affiliation[0].addressNotkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany
experiment.contributor[0].affiliation[0].full_nameEuropean Molecular Biology Laboratory (EMBL) - Hamburg outstation
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experiment.contributor[0].contributor_nameClement
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experiment.contributor[0].orcidnull
experiment.contributor[1].affiliation[0].short_namenull
experiment.contributor[1].affiliation[0].addressGent, Belgium
experiment.contributor[1].affiliation[0].full_nameGhent University
experiment.contributor[1].affiliation[0].webpagehttps://www.ugent.be/
experiment.contributor[1].contributor_nameKenneth
experiment.contributor[1].contributor_surnameVerstraete
experiment.contributor[1].orcidnull
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2018-02-04
experiment.storage_temperaturenull
experiment.cell_temperature15.0
experiment.exposure_time1.0
experiment.number_of_frames14
experiment.wavelength0.103
experiment.sample_detector_distance1.8
experiment.concentration_minnull
experiment.concentration_max20.0
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experiment.flow_rate0.3
experiment.s_min0.066
experiment.s_max6.089
experiment.total_exposure_timenull
experiment.seccolumn10
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fits[0].models[0].softwarePDB (Protein Data Bank)
fits[0].models[0].pdb_link[0].pdb_code6gkt
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fits[0].p_value0.0
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i0_calibration_standardnull
descriptionnull
experiment_descriptionnull
tags[]
intensity_unitarbitrary
experimental_mw30.2
experimental_mw_errornull
guinier_i0_mwnull
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porod_mw28.7
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pddf_i0null
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pddf_dmax_errornull
porod_volume46.0
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first15
guinier_point_last102
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pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDF86_datloglog_img.png
symmetrynull
last_modified2019-12-06T13:07:15.624532+01:00
bragg_peak[]
manifest.json:36 个字段值
字段路径原始值
codeSASDF86
statussuccess
started_at2026-08-11T15:03:47.328759+00:00
finished_at2026-08-11T15:03:57.434452+00:00
source_last_modified2019-12-06T13:07:15.624532+01:00
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查看完整 summary.json 原文
{
  "code": "SASDF86",
  "status": "Published",
  "type_of_curve": "SEC-SAS",
  "angular_unit": "1/A",
  "project": {
    "title": "Protein crystallization promotes type 2 immunity and is reversible by antibody treatment.",
    "publication": {
      "title": "Protein crystallization promotes type 2 immunity and is reversible by antibody treatment.",
      "author_list": "Persson EK, Verstraete K, Heyndrickx I, Gevaert E, Aegerter H, Percier JM, Deswarte K, Verschueren KHG, Dansercoer A, Gras D, Chanez P, Bachert C, Gonçalves A, Van Gorp H, De Haard H, Blanchetot C, Saunders M, Hammad H, Savvides SN, Lambrecht BN",
      "journal": "Science",
      "doi": "10.1126/science.aaw4295",
      "pmid": "31123109",
      "published_date": "2019 May 24"
    },
    "status": "released",
    "submitted_date": "2019-05-10",
    "released_date": "2019-09-13"
  },
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查看完整 manifest.json 原文
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