The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.
Every source field is expanded here, including empty values, list members and fields already shown above.
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{
"code": "SASDV33",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/A",
"project": {
"title": "Structural basis of microtubule-mediated signal transduction.",
"publication": {
"title": "Structural basis of microtubule-mediated signal transduction.",
"author_list": "Choi SR, Blum TB, Giono M, Roy B, Vakonakis I, Schmid D, Oelgarth N, Ranganathan A, Gossert AD, Shivashankar GV, Zippelius A, Steinmetz MO",
"journal": "Cell",
"doi": "10.1016/j.cell.2025.11.011",
"pmid": "41365297",
"published_date": "2025 Dec 8"
},
"status": "released",
"submitted_date": "2024-06-18",
"released_date": "2025-12-11"
},
"pddf_data": null,
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDV33.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDV33_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDV33_kratky_img.png",
"pddf_plot": null,
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"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDV33.sascif",
"experiment": {
"instrument": {
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"name": "Eiger 4M",
"resolution": 75.0
},
"name": "Diamond Light Source",
"city": "Didcot",
"country": "UK",
"beamline_name": "B21",
"beam_geometry": null,
"type_of_source": "X-ray synchrotron",
"point_source": null,
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"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
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"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "Isoform 1 of Rho guanine nucleotide exchange factor 2",
"short_name": null,
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"organism": "Homo sapiens",
"uniprot_code": "Q92974",
"uniprot_range_first": 190,
"uniprot_range_last": 582,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "MSRIESLTRARIDRSRELASKTREKEKMKEAKDARYTNGHLFTTISVSGMTMCYACNKSI\nTAKEALICPTCNVTIHNRCKDTLANCTKVKQKQQKAALLKNNTALQSVSLRSKTTIRERP\nSSAIYPSDSFRQSLLGSRRGRSSLSLAKSVSTTNIAGHFNDESPLGLRRILSQSTDSLNM\nRNRTLSVESLIDEAEVIYSELMSDFEMDEKDFAADSWSLAVDSSFLQQHKKEVMKQQDVI\nYELIQTELHHVRTLKIMTRLFRTGMLEELHLEPGVVQGLFPCVDELSDIHTRFLSQLLER\nRRQALCPGSTRNFVIHRLGDLLISQFSGPSAEQMCKTYSEFCSRHSKALKLYKELYARDK\nRFQQFIRKVTRPAVLKRHGVQECILLVTQRITKYPLLISRILQHSHGIEEERQDLTTALG\nLVKELLSNVDEGIYQLEKGARLQEIYNRMDPRAQTPVPGKGPFGREELLRRKLIHDGCLL\nWKTATGRFKDVLVLLMTDVLVFLQEKDQKYIFPTLDKPSVVSLQNLIVRDIANQEKGMFL\nISAAPPEMYEVHTASRDDRSTWIRVIQQSVRTCPSREDFPLIETEDEAYLRRIKMELQQK\nDRALVELLREKVGLFAEMTHFQAEEDGGSGMALPTLPRGLFRSESLESPRGERLLQDAIR\nEVEGLKDLLVGPGVELLLTPREPALPLEPDSGGNTSPGVTANGEARTFNGSIELCRADSD\nSSQRDRNGNQLRSPQEEALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRA\nNSRDGEAGRAGAAPVAPEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLR\nESEQARALLEREAEEARRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPP\nQPSRGTDRLDLPVTTRSVHRNFEDRERQELGSPEERLQDSSDPDTGSEEEGSSRLSPPHS\nPRDFTRMQDIPEETESRDGEAVASES",
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"number_molecules": 1,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": ""
}
],
"buffer": {
"name": "20mM Tris-Cl, 150mM NaCl, 1mM DTT",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.5,
"deuteration": null
},
"purity_method": null,
"name": "N-terminal domain construct of hsGEFH1_190-582aa fit to DAMMIF and Alphafold2 models",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": null,
"full_name": "Paul Scherrer Institut",
"webpage": null
}
],
"contributor_name": "Sung Ryul",
"contributor_surname": "Choi",
"orcid": "https://orcid.org/0000-0002-4240-2150"
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2021-02-19",
"storage_temperature": null,
"cell_temperature": null,
"exposure_time": null,
"number_of_frames": null,
"wavelength": null,
"sample_detector_distance": null,
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"concentration_max": null,
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"flow_rate": null,
"s_min": 0.102,
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"total_exposure_time": null,
"seccolumn": null
},
"fits": [
{
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{
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"comment": null,
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}
],
"fit_unit": "1/A",
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"software": "FoXS",
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"fit_residual_plot": "SASDV33_fit1_fitresiduals_img.png",
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},
{
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"type_of_model": "dummy",
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"comment": null,
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},
{
"model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDV33_fit2_model2_img.png",
"software": "DAMMIF",
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}
],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDV33_fit2_fixed_fit_img.png",
"software": "DAMMIF",
"chi_square_value": 5.768,
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"fit_residual_plot": "SASDV33_fit2_fitresiduals_img.png",
"fit_data": "https://www.sasbdb.org/media/fitting_files/SASDV33_fit2.fir",
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}
],
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"description": null,
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"tags": [],
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"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": null,
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"pddf_i0": null,
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"guinier_point_first": 1,
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"pddf_point_first": null,
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"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDV33_datloglog_img.png",
"symmetry": null,
"last_modified": "2025-12-11T10:48:35.751806+01:00",
"bragg_peak": []
}
