查看完整 summary.json 原文
{
"code": "SASDVA6",
"status": "Published",
"type_of_curve": "SEC-SAS",
"angular_unit": "1/A",
"project": {
"title": "The structural organisation of pentraxin-3 and its interactions with heavy chains of inter-α-inhibitor regulate crosslinking of the hyaluronan matrix",
"publication": {
"title": "The structural organisation of pentraxin-3 and its interactions with heavy chains of inter-α-inhibitor regulate crosslinking of the hyaluronan matrix",
"author_list": "Shah A, Zhang X, Snee M, Lockhart-Cairns M, Levy C, Jowitt T, Birchenough H, Dean L, Collins R, Dodd R, Roberts A, Enghild J, Mantovani A, Fontana J, Baldock C, Inforzato A, Richter R, Day A",
"journal": "Matrix Biology",
"doi": "10.1016/j.matbio.2025.01.002",
"pmid": null,
"published_date": "2025 Apr"
},
"status": "released",
"submitted_date": "2024-08-19",
"released_date": "2025-07-27"
},
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"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDVA6_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDVA6_kratky_img.png",
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"experiment": {
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"detector": {
"type": null,
"name": "Pilatus 2M",
"resolution": null
},
"name": "Diamond Light Source",
"city": "Didcot",
"country": "UK",
"beamline_name": "B21",
"beam_geometry": "1 x 5 mm",
"type_of_source": "X-ray synchrotron",
"point_source": null,
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"sample_path_length": null,
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"xray_energy": null,
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},
"sample": {
"molecule": [
{
"long_name": "Pentraxin-related protein PTX3",
"short_name": "PTX3",
"sequence": "ENSDDYDLMYVNLDNEIDNGLHPTEDPTPCACGQEHSEWDKLFIMLENSQMRERMLLQATDDV LRGELQRLRE ELGRLAESLARPCAPGAPAEARLTSALDELLQATRDAGRRLARMEGAEAQRPEEAGRALA AVLEELRQTRADLHAVQGWAARSWLPAGCETAILFPMRSKKIFGSVHPVRPMRLESFSACIWVKATDVLN KTILFSYGTKRNPYEIQLYLSYQSIVFVVGGEENKLVAEAMVSLGRWTHLCGTWNSEEGLTSLWVNGELA ATTVEMATGHIVPEGGILQIGQEKNGCCVGGGFDETLAFSGRLTGFNIWDSVLSNEEIRETGGAESCHIR GNIVGWGVTEIQPHGGAQYVS",
"organism": "Homo sapiens",
"uniprot_code": "P26022",
"uniprot_range_first": 18,
"uniprot_range_last": 381,
"oligomerization": "octamer",
"molecular_type": "protein",
"uniprot_sequence": "MHLLAILFCALWSAVLAENSDDYDLMYVNLDNEIDNGLHPTEDPTPCACGQEHSEWDKLF\nIMLENSQMRERMLLQATDDVLRGELQRLREELGRLAESLARPCAPGAPAEARLTSALDEL\nLQATRDAGRRLARMEGAEAQRPEEAGRALAAVLEELRQTRADLHAVQGWAARSWLPAGCE\nTAILFPMRSKKIFGSVHPVRPMRLESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYL\nSYQSIVFVVGGEENKLVAEAMVSLGRWTHLCGTWNSEEGLTSLWVNGELAATTVEMATGH\nIVPEGGILQIGQEKNGCCVGGGFDETLAFSGRLTGFNIWDSVLSNEEIRETGGAESCHIR\nGNIVGWGVTEIQPHGGAQYVS",
"mw": 40.121,
"total_mw": 320.968,
"number_molecules": 8,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": "PTX3 was expressed in Chinese hamster ovary (CHO) cells and is therefore glycosylated. Signal sequence cleaved (amino acids 1-17 of UniProt P26022). D48 isoform."
}
],
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"name": "50 mM Tris-HCl, 150 mM NaCl",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.4,
"deuteration": null
},
"purity_method": null,
"name": "Pentraxin-3",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": "Manchester, UK",
"full_name": "University of Manchester",
"webpage": "http://www.manchester.ac.uk/"
}
],
"contributor_name": "Anokhi",
"contributor_surname": "Shah",
"orcid": "https://orcid.org/0000-0001-9818-5573"
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2018-09-28",
"storage_temperature": 4.0,
"cell_temperature": 20.0,
"exposure_time": 1.0,
"number_of_frames": 620,
"wavelength": 0.095,
"sample_detector_distance": 2.7,
"concentration_min": null,
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"sample_volume": 45.0,
"flow_rate": 0.08,
"s_min": 0.035,
"s_max": 3.696,
"total_exposure_time": null,
"seccolumn": 59
},
"fits": [
{
"models": [
{
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"software": "AllosMod",
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"bead_radius": null,
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"comment": null,
"user": 1107
}
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"description": ""
}
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"tags": [],
"intensity_unit": "arbitrary",
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"guinier_i0_mw": null,
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"pddf_i0": 53.79153,
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"pddf_dmax": 43.05,
"pddf_dmax_error": null,
"porod_volume": 658.0,
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"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 10,
"guinier_point_last": 49,
"pddf_point_first": null,
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"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDVA6_datloglog_img.png",
"symmetry": null,
"last_modified": "2025-07-27T15:24:01.838202+02:00",
"bragg_peak": []
}查看完整 manifest.json 原文
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