The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.
Open the original SASBDB entry
Buffer and Sample Properties
Acquisition Conditions and Instrument
Original SASBDB Plots
Experimental I(q)
Experimental I(q), log-log
Guinier plot
Kratky plot
P(r) plot
Downloadable Files
curve:source record
{
"path": "/data/saxsdb/sasbdb/entries/f3/sasdvf3/source/SASDVF3.dat",
"role": "curve",
"sha256": "5ed1edac3abc8693cfb35cc69ff3c7d040d83e11c32f8dc738d9935b02c1e3b4",
"size": 25750,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDVF3.dat"
}full_entry_zip:source record and ZIP contents (2 items)
{
"path": "/data/saxsdb/sasbdb/entries/f3/sasdvf3/source/SASDVF3.zip",
"role": "full_entry_zip",
"sha256": "f0bcf711b8a7d669acb8a33e0155dbead59addf409af79ba1808b5b0446aea67",
"size": 19139,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDVF3.zip",
"zip_member_count": 2,
"zip_members": [
{
"crc32": "e5513d42",
"name": "SASDVF3/experimental_data/SASDVF3.dat",
"size": 25750
},
{
"crc32": "dfeb67b5",
"name": "SASDVF3/pddf/SASDVF3.out",
"size": 36165
}
],
"zip_validation": "central_directory_readable"
}pddf:source record
{
"path": "/data/saxsdb/sasbdb/entries/f3/sasdvf3/source/SASDVF3.out",
"role": "pddf",
"sha256": "6b49fc43496d8004d91a05c268a0b9db06995c4186764923728d52a136232250",
"size": 36165,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDVF3.out"
}sascif:source record
{
"path": "/data/saxsdb/sasbdb/entries/f3/sasdvf3/source/SASDVF3.sascif",
"role": "sascif",
"status": "not_available",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDVF3.sascif"
}summary:source record
{
"path": "/data/saxsdb/sasbdb/entries/f3/sasdvf3/source/summary.json",
"sha256": "2fd18a8ce596435a30d385f0c04a66b6b374269a041dd1b0e34c5abfa29a8bcd",
"size": 6063,
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDVF3/"
}
All source fields (unfiltered)
Every source field is expanded here, including empty values, list members and fields already shown above.
summary.json:134 field values
manifest.json:34 field values
View the complete summary.json source
{
"code": "SASDVF3",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/nm",
"project": {
"title": "Molecular Insights on the Assembling of ParB1 and ParB1- <i>parS1</i>\n Partition Complex",
"publication": {
"title": "Molecular Insights on the Assembling of ParB1 and ParB1- <i>parS1</i>\n Partition Complex",
"author_list": "Anu A, Lata S, Chaudhuri B",
"journal": "ACS Bio & Med Chem Au",
"doi": "10.1021/acsbiomedchemau.5c00284",
"pmid": null,
"published_date": "2026 Jun 19"
},
"status": "released",
"submitted_date": "2024-06-28",
"released_date": "2026-06-25"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDVF3.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDVF3.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDVF3_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDVF3_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDVF3_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDVF3_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDVF3.sascif",
"experiment": {
"instrument": {
"detector": {
"type": "Dectris",
"name": "Pilatus 1M",
"resolution": 172.0
},
"name": "ESRF",
"city": "Grenoble",
"country": "France",
"beamline_name": "BM29",
"beam_geometry": "",
"type_of_source": "X-ray synchrotron",
"point_source": null,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "Probable chromosome-partitioning protein ParB",
"short_name": "vcParB1",
"sequence": "MAHHHHHHENLFYQGTKRGLGKGLDALLATSSLAREKQQVASLSQSMSAEGELADLSISNLKPGIYQPRKDLSPEALEELAASIQSQGIIQPIVVRHLPTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRGAIAMALIENIQREDLNAMEEAQALERLQNEFNLTHQQVAEVIGKSRTTVTNLLRLNQLSDDVKRLLETKQLEMGHARALLMLEGEQQVEIAQQVAKKQLTVRQTEQLVKKCLSDPSDAKNVSEDLEIQQLSQNLSEKLAAKVSIVRTPNGKSKVTISLDEPHKLELLIAKLQN",
"organism": "Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)",
"uniprot_code": "Q9KNG7",
"uniprot_range_first": 2,
"uniprot_range_last": 293,
"oligomerization": "dimer",
"molecular_type": "protein",
"uniprot_sequence": "MTKRGLGKGLDALLATSSLAREKQQVASLSQSMSAEGELADLSISNLKPGIYQPRKDLSP\nEALEELAASIQSQGIIQPIVVRHLPTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVEDRG\nAIAMALIENIQREDLNAMEEAQALERLQNEFNLTHQQVAEVIGKSRTTVTNLLRLNQLSD\nDVKRLLETKQLEMGHARALLMLEGEQQVEIAQQVAKKQLTVRQTEQLVKKCLSDPSDAKN\nVSEDLEIQQLSQNLSEKLAAKVSIVRTPNGKSKVTISLDEPHKLELLIAKLQN",
"mw": 34.116,
"total_mw": 68.232,
"number_molecules": 2,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": "vcParB1 for batch mode SAXS. The protein construct used for SAXS contains a non-native polyhistidine tag at the N-terminus (MAHHHHHHENLFYQG)."
}
],
"buffer": {
"name": "20 mM Tris pH 7.5, 100 mM NaCl, 5% glycerol, 1 mM EDTA, 5 mM BME, 5 mM MgCl2",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": null,
"deuteration": null
},
"purity_method": null,
"name": "Probable chromosome-partitioning protein ParB (vcParB1) at 13 mg/ml",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": "CSIR",
"address": "Chandigarh, India",
"full_name": "CSIR-Institute of Microbial Technology",
"webpage": "http://www.imtech.res.in/"
}
],
"contributor_name": "ANU",
"contributor_surname": "SODHI",
"orcid": ""
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2023-07-01",
"storage_temperature": 4.0,
"cell_temperature": 20.0,
"exposure_time": 1.0,
"number_of_frames": 10,
"wavelength": 0.0999,
"sample_detector_distance": 2.81,
"concentration_min": null,
"concentration_max": 13.0,
"sample_volume": 100.0,
"flow_rate": 0.07,
"s_min": 0.065,
"s_max": 5.207,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": "5.0",
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [],
"intensity_unit": "arbitrary",
"experimental_mw": 91.2,
"experimental_mw_error": null,
"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": 118.0,
"porod_mw_error": null,
"pddf_i0": 566.1,
"pddf_i0_error": null,
"guinier_i0": 550.33,
"guinier_i0_error": null,
"pddf_rg": 5.162,
"pddf_rg_error": null,
"guinier_rg": 4.7,
"guinier_rg_error": 0.03,
"pddf_dmax": 21.6,
"pddf_dmax_error": null,
"porod_volume": 189.0,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 7,
"guinier_point_last": 20,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDVF3_datloglog_img.png",
"symmetry": null,
"last_modified": "2026-06-25T09:34:40.854615+02:00",
"bragg_peak": []
}
View the complete manifest.json source
{
"code": "SASDVF3",
"status": "success",
"started_at": "2026-08-11T13:59:27.927929+00:00",
"finished_at": "2026-08-11T13:59:35.342623+00:00",
"source_last_modified": "2026-06-25T09:34:40.854615+02:00",
"files": [
{
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDVF3/",
"path": "/data/saxsdb/sasbdb/entries/f3/sasdvf3/source/summary.json",
"size": 6063,
"sha256": "2fd18a8ce596435a30d385f0c04a66b6b374269a041dd1b0e34c5abfa29a8bcd"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDVF3.dat",
"path": "/data/saxsdb/sasbdb/entries/f3/sasdvf3/source/SASDVF3.dat",
"size": 25750,
"sha256": "5ed1edac3abc8693cfb35cc69ff3c7d040d83e11c32f8dc738d9935b02c1e3b4",
"role": "curve"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDVF3.out",
"path": "/data/saxsdb/sasbdb/entries/f3/sasdvf3/source/SASDVF3.out",
"size": 36165,
"sha256": "6b49fc43496d8004d91a05c268a0b9db06995c4186764923728d52a136232250",
"role": "pddf"
},
{
"status": "not_available",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDVF3.sascif",
"path": "/data/saxsdb/sasbdb/entries/f3/sasdvf3/source/SASDVF3.sascif",
"role": "sascif"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDVF3.zip",
"path": "/data/saxsdb/sasbdb/entries/f3/sasdvf3/source/SASDVF3.zip",
"size": 19139,
"sha256": "f0bcf711b8a7d669acb8a33e0155dbead59addf409af79ba1808b5b0446aea67",
"role": "full_entry_zip",
"zip_member_count": 2,
"zip_validation": "central_directory_readable"
}
]
}