The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.
Open the original SASBDB entry
Buffer and Sample Properties
Acquisition Conditions and Instrument
Original SASBDB Plots Experimental I(q) Experimental I(q), log-log Guinier plot Kratky plot P(r) plot
Downloadable Files
curve:source record {
"path": "/data/saxsdb/sasbdb/entries/j7/sasdvj7/source/SASDVJ7.dat",
"role": "curve",
"sha256": "632bed6ed08703df732947a7a9f3e6ab518ff9c44e8394cb9c74524bc6fef4d5",
"size": 31895,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDVJ7.dat"
} full_entry_zip:source record and ZIP contents (2 items) {
"path": "/data/saxsdb/sasbdb/entries/j7/sasdvj7/source/SASDVJ7.zip",
"role": "full_entry_zip",
"sha256": "0ac14c1f7107d3cc51eaed208dfd774119ba7a0bd233c3ffa06c9d5a196ba089",
"size": 26139,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDVJ7.zip",
"zip_member_count": 2,
"zip_members": [
{
"crc32": "085858cd",
"name": "SASDVJ7/experimental_data/SASDVJ7.dat",
"size": 31895
},
{
"crc32": "3adb1302",
"name": "SASDVJ7/pddf/SASDVJ7.out",
"size": 61742
}
],
"zip_validation": "central_directory_readable"
} pddf:source record {
"path": "/data/saxsdb/sasbdb/entries/j7/sasdvj7/source/SASDVJ7.out",
"role": "pddf",
"sha256": "6890b283bf5f4056fdba9135b928b4c9f65891e08902c8498f0edddabc33df75",
"size": 61742,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDVJ7.out"
} sascif:source record {
"path": "/data/saxsdb/sasbdb/entries/j7/sasdvj7/source/SASDVJ7.sascif",
"role": "sascif",
"status": "not_available",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDVJ7.sascif"
} summary:source record {
"path": "/data/saxsdb/sasbdb/entries/j7/sasdvj7/source/summary.json",
"sha256": "c133bbab6278cb4b6e3b13a1b231e899820a0cf9bb7ec8d570d3c9c311abc741",
"size": 6717,
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDVJ7/"
}
All source fields (unfiltered)
Every source field is expanded here, including empty values, list members and fields already shown above.
summary.json:134 field values
manifest.json:34 field values
View the complete summary.json source {
"code": "SASDVJ7",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/A",
"project": {
"title": "Dimerization of ADAR1 modulates site-specificity of RNA editing",
"publication": {
"title": "Dimerization of ADAR1 modulates site-specificity of RNA editing",
"author_list": "Mboukou A, Rajendra V, Messmer S, Mandl T, Catala M, Tisné C, Jantsch M, Barraud P",
"journal": "Nature Communications",
"doi": "10.1038/s41467-024-53777-2",
"pmid": null,
"published_date": "2024 Nov 21"
},
"status": "released",
"submitted_date": "2024-09-19",
"released_date": "2024-11-21"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDVJ7.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDVJ7.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDVJ7_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDVJ7_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDVJ7_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDVJ7_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDVJ7.sascif",
"experiment": {
"instrument": {
"detector": {
"type": null,
"name": "Eiger 4M",
"resolution": 75.0
},
"name": "SOLEIL",
"city": "Saint-Aubin",
"country": "France",
"beamline_name": "SWING",
"beam_geometry": null,
"type_of_source": "X-ray synchrotron",
"point_source": null,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "Third double-stranded RNA-binding domain of human ADAR1 (wild-type, residues 708-801, i.e. ADAR1-dsRBD3)",
"short_name": "ADAR1-dsRBD3",
"sequence": "MGSSHHHHHHSSGLVPRGSHMMPNKVRKIGELVRYLNTNPVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALRVLIGENEKAER",
"organism": "Homo sapiens",
"uniprot_code": "P55265",
"uniprot_range_first": 708,
"uniprot_range_last": 801,
"oligomerization": "dimer",
"molecular_type": "protein",
"uniprot_sequence": "MNPRQGYSLSGYYTHPFQGYEHRQLRYQQPGPGSSPSSFLLKQIEFLKGQLPEAPVIGKQ\nTPSLPPSLPGLRPRFPVLLASSTRGRQVDIRGVPRGVHLRSQGLQRGFQHPSPRGRSLPQ\nRGVDCLSSHFQELSIYQDQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLA\nKKGKLQKEAGTPPLWKIAVSTQAWNQHSGVVRPDGHSQGAPNSDPSLEPEDRNSTSVSED\nLLEPFIAVSAQAWNQHSGVVRPDSHSQGSPNSDPGLEPEDSNSTSALEDPLEFLDMAEIK\nEKICDYLFNVSDSSALNLAKNIGLTKARDINAVLIDMERQGDVYRQGTTPPIWHLTDKKR\nERMQIKRNTNSVPETAPAAIPETKRNAEFLTCNIPTSNASNNMVTTEKVENGQEPVIKLE\nNRQEARPEPARLKPPVHYNGPSKAGYVDFENGQWATDDIPDDLNSIRAAPGEFRAIMEMP\nSFYSHGLPRCSPYKKLTECQLKNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVV\nINGREFPPAEAGSKKVAKQDAAMKAMTILLEEAKAKDSGKSEESSHYSTEKESEKTAESQ\nTPTPSATSFFSGKSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSV\nSAPSKKVAKQMAAEEAMKALHGEATNSMASDNQPEGMISESLDNLESMMPNKVRKIGELV\nRYLNTNPVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQG\nKQEAADAALRVLIGENEKAERMGFTEVTPVTGASLRRTMLLLSRSPEAQPKTLPLTGSTF\nHDQIAMLSHRCFNTLTNSFQPSLLGRKILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLS\nLKGETVNDCHAEIISRRGFIRFLYSELMKYNSQTAKDSIFEPAKGGEKLQIKKTVSFHLY\nISTAPCGDGALFDKSCSDRAMESTESRHYPVFENPKQGKLRTKVENGEGTIPVESSDIVP\nTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPIYLKSVTLGYLFSQGHLTRAI\nCCRVTRDGSAFEDGLRHPFIVNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYDLEILD\nGTRGTVDGPRNELSRVSKKNIFLLFKKLCSFRYRRDLLRLSYGEAKKAARDYETAKNYFK\nKGLKDMGYGNWISKPQEEKNFYLCPV",
"mw": 12.597,
"total_mw": 25.194,
"number_molecules": 2,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": ""
}
],
"buffer": {
"name": "20 mM Na-phosphate, 100 mM NaCl, 2 mM 2-mercaptoethanol",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.0,
"deuteration": null
},
"purity_method": null,
"name": "Third double-stranded RNA-binding domain of Human Double-stranded RNA-specific adenosine deaminase (ADAR1) (wild-type, residues 708-801, i.e. ADAR1-dsRBD3)",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": null,
"full_name": "IBPC-CNRS",
"webpage": null
}
],
"contributor_name": "Pierre",
"contributor_surname": "Barraud",
"orcid": "https://orcid.org/0000-0003-4460-8360"
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2021-10-08",
"storage_temperature": 15.0,
"cell_temperature": 10.0,
"exposure_time": 0.99,
"number_of_frames": 21,
"wavelength": 0.1033,
"sample_detector_distance": 2.0,
"concentration_min": null,
"concentration_max": 5.0,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.1,
"s_max": 3.299,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": "5.0",
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [],
"intensity_unit": "arbitrary",
"experimental_mw": 24.3,
"experimental_mw_error": null,
"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": 22.0,
"porod_mw_error": null,
"pddf_i0": 0.01527,
"pddf_i0_error": null,
"guinier_i0": 0.0151153,
"guinier_i0_error": null,
"pddf_rg": 2.53,
"pddf_rg_error": null,
"guinier_rg": 2.44,
"guinier_rg_error": 0.35,
"pddf_dmax": 9.13,
"pddf_dmax_error": null,
"porod_volume": 39.0,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 47,
"guinier_point_last": 95,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDVJ7_datloglog_img.png",
"symmetry": null,
"last_modified": "2024-11-21T15:29:36.723051+01:00",
"bragg_peak": []
}
View the complete manifest.json source {
"code": "SASDVJ7",
"status": "success",
"started_at": "2026-08-11T15:31:37.860119+00:00",
"finished_at": "2026-08-11T15:31:44.984392+00:00",
"source_last_modified": "2024-11-21T15:29:36.723051+01:00",
"files": [
{
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDVJ7/",
"path": "/data/saxsdb/sasbdb/entries/j7/sasdvj7/source/summary.json",
"size": 6717,
"sha256": "c133bbab6278cb4b6e3b13a1b231e899820a0cf9bb7ec8d570d3c9c311abc741"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDVJ7.dat",
"path": "/data/saxsdb/sasbdb/entries/j7/sasdvj7/source/SASDVJ7.dat",
"size": 31895,
"sha256": "632bed6ed08703df732947a7a9f3e6ab518ff9c44e8394cb9c74524bc6fef4d5",
"role": "curve"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDVJ7.out",
"path": "/data/saxsdb/sasbdb/entries/j7/sasdvj7/source/SASDVJ7.out",
"size": 61742,
"sha256": "6890b283bf5f4056fdba9135b928b4c9f65891e08902c8498f0edddabc33df75",
"role": "pddf"
},
{
"status": "not_available",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDVJ7.sascif",
"path": "/data/saxsdb/sasbdb/entries/j7/sasdvj7/source/SASDVJ7.sascif",
"role": "sascif"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDVJ7.zip",
"path": "/data/saxsdb/sasbdb/entries/j7/sasdvj7/source/SASDVJ7.zip",
"size": 26139,
"sha256": "0ac14c1f7107d3cc51eaed208dfd774119ba7a0bd233c3ffa06c9d5a196ba089",
"role": "full_entry_zip",
"zip_member_count": 2,
"zip_validation": "central_directory_readable"
}
]
}