查看完整 summary.json 原文
{
"code": "SASDW37",
"status": "Published",
"type_of_curve": "SEC-SAS",
"angular_unit": "1/nm",
"project": {
"title": "Programmable Protein-DNA Composite Nanostructures: from Nanostructure Construction to Protein-Induced Micro-Scale Material Self-Assembly and Functionalization.",
"publication": {
"title": "Programmable Protein-DNA Composite Nanostructures: from Nanostructure Construction to Protein-Induced Micro-Scale Material Self-Assembly and Functionalization.",
"author_list": "Zhou W, Strmšek Ž, Snoj J, Škarabot M, Jerala R",
"journal": "Small",
"doi": "10.1002/smll.202502060",
"pmid": "40442952",
"published_date": "2025 Jul"
},
"status": "released",
"submitted_date": "2025-02-06",
"released_date": "2025-08-01"
},
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"name": "Pilatus 6M",
"resolution": null
},
"name": "PETRA III",
"city": "DESY; Hamburg",
"country": "Germany",
"beamline_name": "EMBL P12",
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"type_of_source": "X-ray synchrotron",
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{
"long_name": "TET12-2Sc-RFP-DCV",
"short_name": "SSRD",
"sequence": ">SSRD\r\nMLEEELKQLEEELQAIEEQLAQLQWKAQARKEKLAQLKEKLSGPGSPEDEIQQLEEEISQLEQKNSELKEKNQELKYGSGPGDIEQELERAKESIRRLEQEVNQERSRMQYLQTLLEKSGPGQLEDKVEELLSKNYHLENEVERLKKLVGSGDSATHIKFSKRDEDGKELAGATMELRDSSGKTISTWISDGQVKDFYLYPGKYTFVETAAPDGYEVATAITFTVNEQGQVTVNGSGLEEELKQLEEELQAIEEQLAQLQWKAQARKEKLAQLKEKLSGPGSPEDEIQQLEEKNSQLKQEISQLEEKNQELKYGSGPGQLEDKVEELLSKNYHLENEVERLKKLVGSGPGSPEDKISQLKEKIQQLKQENQQLEEENSQLEYGSGDSATHIKFSKRDEDGKELAGATMELRDSSGKTISTWISDGQVKDFYLYPGKYTFVETAAPDGYEVATAITFTVNEQGQVTVNGSGSPEDENSQLEEKISQLKQKNSELKEEIQQLEYGSGPGSPEDKISELKEENQQLEQKIQQLKEENSQLEYGSGMASSEDVIKEFMRFKVRMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQFQYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASTERMYPEDGALKGEIKMRLKLKDGGHYDAEVKTTYMAKKPVQLPGAYKTDIKLDITSHNEDYTIVEQYERRHSTGAGSGDIEQELERAKESIRRLEQEVNQERSRMQYLQTLLEKSGPGSPEDKNSELKEEIQQLEEENQQLEEKISELKYGGSGKSGNYSYKRWVFTINNPTFEDYVHVLEFCTLDNCKFAIVGEEKGANGTPHLQGFLNLRSNARAAALEESLGGRAWLSRARGSDEDNEEYCAKESTYLRVGEPVSKGRSSLEHHHHHHHH",
"organism": "synthetic construct",
"uniprot_code": null,
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"uniprot_range_last": null,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "",
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"number_molecules": 1,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": "CCPO is short for coiled coil protein origami (CCPO) tetrahedron with 2 SpyCatcher domains, 1 RFP and 1 DCV domain inserted at each of 4 vertices. DCV is an endonuclease ssDNA binding domain originated from Muscovy duck circovirus and RFP is a red fluorescent protein."
}
],
"buffer": {
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"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.5,
"deuteration": null
},
"purity_method": null,
"name": "SSRD - Coiled-Coil Tetrahedron with Four Functional Domains (2x SpyCatcher, RFP, DCV)",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": "KI",
"address": "Ljubljana, Slovenia",
"full_name": "Kemijski inštitut",
"webpage": null
}
],
"contributor_name": "Jaka",
"contributor_surname": "Snoj",
"orcid": null
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2024-09-24",
"storage_temperature": 10.0,
"cell_temperature": 20.0,
"exposure_time": 1.0,
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"sample_detector_distance": 3.0,
"concentration_min": null,
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"user": 1027
}
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"description": ""
}
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"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
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"i0_calibration_standard": null,
"description": "The experimentally determined protein mass (SEC-MALS) is overestimated due to the presence of a fluorescent protein in the sample. The light scattering laser operates at a wavelength that excites the fluorescent protein, leading to inaccurate signal measurements.",
"experiment_description": null,
"tags": [],
"intensity_unit": "arbitrary",
"experimental_mw": 111.6,
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"guinier_i0_mw": null,
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"porod_mw": 171.0,
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"pddf_i0": 12050.0,
"pddf_i0_error": null,
"guinier_i0": 12021.8,
"guinier_i0_error": null,
"pddf_rg": 4.451,
"pddf_rg_error": null,
"guinier_rg": 4.43,
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"pddf_dmax": 13.6,
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"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 22,
"guinier_point_last": 71,
"pddf_point_first": null,
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"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDW37_datloglog_img.png",
"symmetry": null,
"last_modified": "2025-08-01T07:48:35.765614+02:00",
"bragg_peak": []
}
查看完整 manifest.json 原文
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"finished_at": "2026-08-11T15:21:29.384174+00:00",
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