查看完整 summary.json 原文
{
"code": "SASDWG9",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/A",
"project": {
"title": "A class III ligand oscillates between internal and terminal binding modes as it engages with the Dishevelled PDZ domain.",
"publication": {
"title": "A class III ligand oscillates between internal and terminal binding modes as it engages with the Dishevelled PDZ domain.",
"author_list": "Kumar J, Micka M, Komárek J, Klumpler T, Bystrý V, Sprangers R, Bařinka C, Bryja V, Tripsianes K",
"journal": "Structure",
"doi": "10.1016/j.str.2025.05.012",
"pmid": "40516532",
"published_date": "2025 Jun 5"
},
"status": "released",
"submitted_date": "2025-02-25",
"released_date": "2025-06-17"
},
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"name": "Rigaku HyPix-3000",
"resolution": 100.0
},
"name": "CEITEC",
"city": "Brno",
"country": "Czech Republic",
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{
"long_name": "Segment polarity protein dishevelled homolog DVL-3",
"short_name": "DLV3_PDZ",
"sequence": "GAMALNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNEINFENMSNDDAVRVLREIVHKPGPITLTVAKCWDPSPRGCFTLPRSE",
"organism": "Homo sapiens",
"uniprot_code": "Q92997",
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"uniprot_range_last": 351,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "MGETKIIYHLDGQETPYLVKLPLPAERVTLADFKGVLQRPSYKFFFKSMDDDFGVVKEEI\nSDDNAKLPCFNGRVVSWLVSAEGSHPDPAPFCADNPSELPPPMERTGGIGDSRPPSFHPH\nAGGGSQENLDNDTETDSLVSAQRERPRRRDGPEHATRLNGTAKGERRREPGGYDSSSTLM\nSSELETTSFFDSDEDDSTSRFSSSTEQSSASRLMRRHKRRRRKQKVSRIERSSSFSSITD\nSTMSLNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLL\nQVNEINFENMSNDDAVRVLREIVHKPGPITLTVAKCWDPSPRGCFTLPRSEPIRPIDPAA\nWVSHTAAMTGTFPAYGMSPSLSTITSTSSSITSSIPDTERLDDFHLSIHSDMAAIVKAMA\nSPESGLEVRDRMWLKITIPNAFIGSDVVDWLYHNVEGFTDRREARKYASNLLKAGFIRHT\nVNKITFSEQCYYIFGDLCGNMANLSLHDHDGSSGASDQDTLAPLPHPGAAPWPMAFPYQY\nPPPPHPYNPHPGFPELGYSYGGGSASSQHSEGSRSSGSNRSGSDRRKEKDPKAGDSKSGG\nSGSESDHTTRSSLRGPRERAPSERSGPAASEHSHRSHHSLASSLRSHHTHPSYGPPGVPP\nLYGPPMLMMPPPPAAMGPPGAPPGRDLASVPPELTASRQSFRMAMGNPSEFFVDVM",
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"number_molecules": 1,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": "PDZ domain of the Segment polarity protein dishevelled homolog DVL-3. The protein construct used for SAXS contains an additional four non-native amino acids at the N-terminus (GAMA)."
}
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"comment": null,
"additive": null,
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"pka": null,
"ph": 6.5,
"deuteration": null
},
"purity_method": null,
"name": "PDZ domain of the segment polarity protein dishevelled homolog DVL-3",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
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"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": null,
"full_name": "CEITEC - Central European Institute of Technology, Masaryk University",
"webpage": "https://www.ceitec.eu/"
}
],
"contributor_name": "Tomas",
"contributor_surname": "Klumpler",
"orcid": null
}
],
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"date": "2021-01-27",
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"cell_temperature": 25.0,
"exposure_time": 600.0,
"number_of_frames": 6,
"wavelength": 0.154,
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"fits": [
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"comment": null,
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}
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"software": "CRYSOL",
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"description": null,
"experiment_description": "SAXS data from solutions of PDZ domain of the segment polarity protein dishevelled homolog DVL-3 in 50 mM sodium phosphate, 50 mM NaCl, 0.5 mM EDTA, pH 6.5 were collected using a Rigaku BioSAXS-2000 instrument at CEITEC (Brno, Czech Republic) equipped with a Rigaku HyPix-3000 detector at a sample-detector distance of 0.5 m and at a wavelength of λ = 0.154 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 5.00 mg/ml was measured at 25°C. Six successive 600 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.",
"tags": [],
"intensity_unit": "arbitrary",
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"estimated_volume": null,
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"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDWG9_datloglog_img.png",
"symmetry": null,
"last_modified": "2025-06-17T09:21:01.066938+02:00",
"bragg_peak": []
}查看完整 manifest.json 原文
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