下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;未声明的单位不会由 SAXSdb 猜测。
打开 SASBDB 原始条目
缓冲液与样品属性
采集条件与仪器
SASBDB 原始图 实验 I(q) 实验 I(q) log-log Guinier 图 Kratky 图 P(r) 图
可下载文件
curve:来源记录 {
"path": "/data/saxsdb/sasbdb/entries/l3/sasdwl3/source/SASDWL3.dat",
"role": "curve",
"sha256": "53b86d21c77ed8d80295f1ee4916b3c119a374bbb909a59dd4c67f4660c80591",
"size": 99215,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDWL3.dat"
} full_entry_zip:来源记录与 ZIP 内部目录(4 项) {
"path": "/data/saxsdb/sasbdb/entries/l3/sasdwl3/source/SASDWL3.zip",
"role": "full_entry_zip",
"sha256": "821e4a03f5df58f70a87c56277218a0f4ad12abcef5b98e9ffb708d70cd6005b",
"size": 112816,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDWL3.zip",
"zip_member_count": 4,
"zip_members": [
{
"crc32": "7ab9915a",
"name": "SASDWL3/experimental_data/SASDWL3.dat",
"size": 99215
},
{
"crc32": "5fccba84",
"name": "SASDWL3/pddf/SASDWL3.out",
"size": 121107
},
{
"crc32": "87a70b94",
"name": "SASDWL3/SASDWL3_fit1.fit",
"size": 108698
},
{
"crc32": "402e48bc",
"name": "SASDWL3/SASDWL3_fit1_model1.pdb",
"size": 76630
}
],
"zip_validation": "central_directory_readable"
} pddf:来源记录 {
"path": "/data/saxsdb/sasbdb/entries/l3/sasdwl3/source/SASDWL3.out",
"role": "pddf",
"sha256": "5f05025989390450c8c1b4674a049d404cbed537bfac899621a93f76671b07d7",
"size": 121107,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDWL3.out"
} sascif:来源记录 {
"path": "/data/saxsdb/sasbdb/entries/l3/sasdwl3/source/SASDWL3.sascif",
"role": "sascif",
"status": "not_available",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDWL3.sascif"
} summary:来源记录 {
"path": "/data/saxsdb/sasbdb/entries/l3/sasdwl3/source/summary.json",
"sha256": "8c059a71fb73b9e2af72f9dc311eb82cd881ac9a6fbfdf34f9c4ef35c9676de8",
"size": 7829,
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDWL3/"
}
全部来源字段(无筛选)
这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。
summary.json:156 个字段值
manifest.json:34 个字段值
查看完整 summary.json 原文 {
"code": "SASDWL3",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/A",
"project": {
"title": "Structure of the Thomasclavelia ramosa immunoglobulin A protease reveals a modular and minimizable architecture distinct from other immunoglobulin A proteases.",
"publication": {
"title": "Structure of the Thomasclavelia ramosa immunoglobulin A protease reveals a modular and minimizable architecture distinct from other immunoglobulin A proteases.",
"author_list": "Tran N, Frenette A, Holyoak T",
"journal": "Proc Natl Acad Sci U S A",
"doi": "10.1073/pnas.2503549122",
"pmid": "40854123",
"published_date": "2025 Sep 2"
},
"status": "released",
"submitted_date": "2024-12-06",
"released_date": "2025-08-11"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDWL3.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDWL3.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDWL3_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDWL3_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDWL3_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDWL3_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDWL3.sascif",
"experiment": {
"instrument": {
"detector": {
"type": null,
"name": "Eiger 4M",
"resolution": 75.0
},
"name": "Cornell High Energy Synchrotron Source (CHESS)",
"city": "Ithaca, NY",
"country": "USA",
"beamline_name": "ID7A1 BioSAXS / HP-Bio Beamline",
"beam_geometry": null,
"type_of_source": "X-ray synchrotron",
"point_source": true,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "IgA protease",
"short_name": "IgAP CTD2",
"sequence": "EHTHNLTLVAAKAATCTTAGNSAYYTCDGCDKWFADATGSVEITDKTSVKIPAPGHTAGTEWKSDDTNHWHECTVAGCGVIIESTKSAHTAGEWIVDTPATATTAGTKHKECTVCHRVLETQPIPSTGT",
"organism": "Thomasclavelia ramosa",
"uniprot_code": "Q9AES2",
"uniprot_range_first": 880,
"uniprot_range_last": 1008,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "MTKKLMTKKITAIFLALYMAISVLPMTIQAASKPDIKVGDYVKMGVYNNASILWRCVSID\nNNGPLMLADKIVDTLAYDAKTNDNSNSKSHSRSYKRDDYGSNYWKDSNMRSWLNSTAAEG\nKVDWLCGNPPKDGYVSGVGAYNEKAGFLNAFSKSEIAAMKTVTQRSLVSHPEYNKGIVDG\nDANSDLLYYTDISEAVANYDSSYFETTTEKVFLLDVKQANAVWKNLKGYYVAYNNDGMAW\nPYWLRTPVTDCNHDMRYISSSGQVGRYAPWYSDLGVRPAFYLDSEYFVTTSGSGSQSSPY\nIGSAPNKQEDDYTISEPAEDANPDWNVSTEQSIQLTLGPWYSNDGKYSNPTIPVYTIQKT\nRSDTENMVVVVCGEGYTKSQQGKFINDVKRLWQDAMKYEPYRSYADRFNVYALCTASEST\nFDNGGSTFFDVIVDKYNSPVISNNLHGSQWKNHIFERCIGPEFIEKIHDAHIKKKCDPNT\nIPSGSEYEPYYYVHDYIAQFAMVVNTKSDFGGAYNNREYGFHYFISPSDSYRASKTFAHE\nFGHGLLGLGDEYSNGYLLDDKELKSLNLSSVEDPEKIKWRQLLGFRNTYTCRNAYGSKML\nVSSYECIMRDTNYQFCEVCRLQGFKRMSQLVKDVDLYVATPEVKEYTGAYSKPSDFTDLE\nTSSYYNYTYNRNDRLLSGNSKSRFNTNMNGKKIELRTVIQNISDKNARQLKFKMWIKHSD\nGSVATDSSGNPLQTVQTFDIPVWNDKANFWPLGALDHIKSDFNSGLKSCSLIYQIPSDAQ\nLKSGDTVAFQVLDENGNVLADDNTETQRYTTVSIQYKFEDGSEIPNTAGGTFTVPYGTKL\nDLTPAKTLYDYEFIKVDGLNKPIVSDGTVVTYYYKNKNEEHTHNLTLVAAKAATCTTAGN\nSAYYTCDGCDKWFADATGSVEITDKTSVKIPAPGHTAGTEWKSDDTNHWHECTVAGCGVI\nIESTKSAHTAGEWIVDTPATATTAGTKHKECTVCHRVLETQPIPSTGTELKIIAGDNQIY\nNKASGSDVTITCNGDFAKFTGIKVDGSVVDSSNYTAVSGSTVLTLKASYLGTLTDGSHTI\nTFVYTDGEANANLTVRTAGSGHIHDYGTEWKSNADNHWHECNCGDKKDEAAHSFKWVVDK\nEATATKKGSKHEECKICGYKRSAVEIPATGTSTAPTDTTKPNDTTKPGNTNGSEKSPQTG\nDNSNIFLWFALLFVSAAGVTGITAYNKKKKEHAE",
"mw": 13.587,
"total_mw": 13.587,
"number_molecules": 1,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": "Immunoglobulin A protease C-terminal domain #2 (CTD2)."
}
],
"buffer": {
"name": "25 mM HEPES, 1 mM TCEP",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.5,
"deuteration": null
},
"purity_method": null,
"name": "Thomasclavelia ramosa immunoglobulin A protease C-terminal domain #2",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": null,
"full_name": "University of Waterloo",
"webpage": null
}
],
"contributor_name": "Norman",
"contributor_surname": "Tran",
"orcid": "https://orcid.org/0000-0002-9372-9444"
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2023-06-26",
"storage_temperature": 4.0,
"cell_temperature": 25.0,
"exposure_time": 1.0,
"number_of_frames": 15,
"wavelength": 0.11013,
"sample_detector_distance": null,
"concentration_min": null,
"concentration_max": 3.0,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.082,
"s_max": 5.135,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [
{
"models": [
{
"model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDWL3_fit1_model1_img.png",
"software": "AlphaFold",
"pdb_link": [],
"model_title": null,
"type_of_model": "atomic",
"software_version": null,
"model_data": "https://www.sasbdb.org/media/pdb_file/SASDWL3_fit1_model1.pdb",
"model_mw": 13.66,
"bead_radius": null,
"log": null,
"symmetry": null,
"comment": null,
"user": 928
}
],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDWL3_fit1_fixed_fit_img.png",
"software": "FoXS",
"chi_square_value": 0.898046,
"p_value": 0.0076,
"fit_residual_plot": "SASDWL3_fit1_fitresiduals_img.png",
"fit_data": "https://www.sasbdb.org/media/fitting_files/SASDWL3_fit1.fit",
"fit_log": null,
"software_version": null,
"description": ""
}
],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": null,
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [],
"intensity_unit": "arbitrary",
"experimental_mw": 9.2,
"experimental_mw_error": null,
"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": 7.25,
"porod_mw_error": null,
"pddf_i0": 0.031,
"pddf_i0_error": null,
"guinier_i0": 0.0304813,
"guinier_i0_error": null,
"pddf_rg": 2.68,
"pddf_rg_error": null,
"guinier_rg": 2.499,
"guinier_rg_error": 0.421,
"pddf_dmax": 9.6,
"pddf_dmax_error": null,
"porod_volume": 11.6,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 16,
"guinier_point_last": 122,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDWL3_datloglog_img.png",
"symmetry": null,
"last_modified": "2025-09-01T15:34:46.855497+02:00",
"bragg_peak": []
}
查看完整 manifest.json 原文 {
"code": "SASDWL3",
"status": "success",
"started_at": "2026-08-11T14:03:11.309325+00:00",
"finished_at": "2026-08-11T14:03:20.026051+00:00",
"source_last_modified": "2025-09-01T15:34:46.855497+02:00",
"files": [
{
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDWL3/",
"path": "/data/saxsdb/sasbdb/entries/l3/sasdwl3/source/summary.json",
"size": 7829,
"sha256": "8c059a71fb73b9e2af72f9dc311eb82cd881ac9a6fbfdf34f9c4ef35c9676de8"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDWL3.dat",
"path": "/data/saxsdb/sasbdb/entries/l3/sasdwl3/source/SASDWL3.dat",
"size": 99215,
"sha256": "53b86d21c77ed8d80295f1ee4916b3c119a374bbb909a59dd4c67f4660c80591",
"role": "curve"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDWL3.out",
"path": "/data/saxsdb/sasbdb/entries/l3/sasdwl3/source/SASDWL3.out",
"size": 121107,
"sha256": "5f05025989390450c8c1b4674a049d404cbed537bfac899621a93f76671b07d7",
"role": "pddf"
},
{
"status": "not_available",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDWL3.sascif",
"path": "/data/saxsdb/sasbdb/entries/l3/sasdwl3/source/SASDWL3.sascif",
"role": "sascif"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDWL3.zip",
"path": "/data/saxsdb/sasbdb/entries/l3/sasdwl3/source/SASDWL3.zip",
"size": 112816,
"sha256": "821e4a03f5df58f70a87c56277218a0f4ad12abcef5b98e9ffb708d70cd6005b",
"role": "full_entry_zip",
"zip_member_count": 4,
"zip_validation": "central_directory_readable"
}
]
}