SASDWP8

β-Lactoglobulin A at 26.1 µM (pH 7.0)

数据类型:SASBDB 实验数据 状态:Published 曲线类型:Single concentration 最后更新:2025-03-28T13:52:37.483354+01:00
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1. 样品、组分与实验条件 Sample & Experiment

样品 1 · β-Lactoglobulin A at 26.1 µM (pH 7.0)

浓度— – 0.48 缓冲液 / pH20 mM MOPS, 100 mM NaCl, 1 mM TCEP / —
实验温度20.0 设备 / 束线ESRF / BM29
波长0.0999 nm曝光0.5 s × 20

分子组分

组分类型 / 物种UniProt 与构建体寡聚状态分子量
Beta-lactoglobulin
查看序列
MKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
proteinBos taurusP027541–178unknown分子数 —19.883 kDa

实验曲线

曲线点数 / 列q 范围误差质量负强度点来源文件
1973[3]0.1767703–5.179237 1/nm含误差列缺失 029sasbdb/entries/p8/sasdwp8/source/SASDWP8.dat
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2. SASBDB 报告的指标 Reported Results

指标方法数值误差单位
dmaxP(r)8.5—nm
i0Guinier5.58446—arbitrary
mwExperimental10.4—kDa
mwPorod18.75—kDa
porod_volumePorod30.0—nm³
rgGuinier1.970.024nm

这些数值是 SASBDB 来源记录,不是 SAXSdb 对实验曲线重新计算的结果。

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3. 来源拟合与模型 Source Fits & Models

该条目没有来源拟合记录。

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4. 来源文件索引 Source Files

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5. 实验说明与论文 Experiment & Publication

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6. 完整来源记录 Complete Source Record

下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;未声明的单位不会由 SAXSdb 猜测。

打开 SASBDB 原始条目

缓冲液与样品属性

缓冲液名称20 mM MOPS, 100 mM NaCl, 1 mM TCEP缓冲液浓度—
pH—添加剂—
缓冲液说明—
纯度测定方法—消光系数—
吸收值—散射对比度—
比体积 / 干体积— / —混合物 / 氘代— / —

采集条件与仪器

测量日期2021-11-21储存 / 测量温度10.0 / 20.0
曝光时间0.5帧数20
波长0.0999样品-探测器距离2.8
光源X-ray synchrotron探测器Pilatus 1M
机构 / 束线ESRF / BM29 · Grenoble, France
q 范围0.177 – 5.179样品体积 / 流速— / —

SASBDB 原始图

实验 I(q)
实验 I(q)
实验 I(q) log-log
实验 I(q) log-log
Guinier 图
Guinier 图
Kratky 图
Kratky 图

可下载文件

类别文件状态大小校验值下载与查看
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pddfsasbdb/entries/p8/sasdwp8/source/SASDWP8.outnot_listed——下载查看原文件
sascifsasbdb/entries/p8/sasdwp8/source/SASDWP8.sascifnot_available——下载查看原文件源站
summarysasbdb/entries/p8/sasdwp8/source/summary.jsondownloaded56799401e96b1372b15be4b2676c57112da1892139b095a724435529174f9f93e03b下载查看原文件源站
curve:来源记录
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full_entry_zip:来源记录与 ZIP 内部目录(1 项)
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pddf:来源记录
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sascif:来源记录
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summary:来源记录
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全部来源字段(无筛选)

这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。

summary.json:134 个字段值
字段路径原始值
codeSASDWP8
statusPublished
type_of_curveSingle concentration
angular_unit1/nm
project.titleKDSAXS: A tool for Analyzing Binding Equilibria with SAXS Data using Explicit Models
project.publication.titleKDSAXS: A tool for Analyzing Binding Equilibria with SAXS Data using Explicit Models
project.publication.author_listGomes T, Ruiz L, Martin-Malpartida P, Bernadó P, Baptista A, Macias M, Cordeiro T
project.publication.journalJournal of Molecular Biology
project.publication.doi10.1016/j.jmb.2025.169103
project.publication.pmidnull
project.publication.published_date2025 Mar
project.statusreleased
project.submitted_date2025-03-02
project.released_date2025-03-28
pddf_datanull
intensities_datahttps://www.sasbdb.org/media/intensities_files/SASDWP8.dat
intensities_log_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDWP8_dat_img.png
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pddf_plotnull
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sascif_datahttps://www.sasbdb.org/media/sascif/sascif_files/SASDWP8.sascif
experiment.instrument.detector.typeDectris
experiment.instrument.detector.namePilatus 1M
experiment.instrument.detector.resolution172.0
experiment.instrument.nameESRF
experiment.instrument.cityGrenoble
experiment.instrument.countryFrance
experiment.instrument.beamline_nameBM29
experiment.instrument.beam_geometry
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
experiment.instrument.line_collimation_slitlengthnull
experiment.instrument.line_collimation_integrationwidthnull
experiment.instrument.xray_energynull
experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameBeta-lactoglobulin
experiment.sample.molecule[0].short_nameBLG A
experiment.sample.molecule[0].sequenceMKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVE ELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLL FCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
experiment.sample.molecule[0].organismBos taurus
experiment.sample.molecule[0].uniprot_codeP02754
experiment.sample.molecule[0].uniprot_range_first1
experiment.sample.molecule[0].uniprot_range_last178
experiment.sample.molecule[0].oligomerizationunknown
experiment.sample.molecule[0].molecular_typeprotein
experiment.sample.molecule[0].uniprot_sequenceMKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVE ELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLL FCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
experiment.sample.molecule[0].mw19.883
experiment.sample.molecule[0].total_mw19.883
experiment.sample.molecule[0].number_molecules0
experiment.sample.molecule[0].complex_stateFalse
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionMKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVE ELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLL FCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
experiment.sample.buffer.name20 mM MOPS, 100 mM NaCl, 1 mM TCEP
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.phnull
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameβ-Lactoglobulin A at 26.1 µM (pH 7.0)
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_namenull
experiment.contributor[0].affiliation[0].addressOeiras, Portugal
experiment.contributor[0].affiliation[0].full_nameInstituto de Tecnologia Química e Biológica António Xavier, Universidade de Lisboa
experiment.contributor[0].affiliation[0].webpagehttp://www.itqb.unl.pt
experiment.contributor[0].contributor_nameTiago
experiment.contributor[0].contributor_surnameCordeiro
experiment.contributor[0].orcidhttps://orcid.org/0000-0003-2663-3220
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2021-11-21
experiment.storage_temperature10.0
experiment.cell_temperature20.0
experiment.exposure_time0.5
experiment.number_of_frames20
experiment.wavelength0.0999
experiment.sample_detector_distance2.8
experiment.concentration_minnull
experiment.concentration_max0.48
experiment.sample_volumenull
experiment.flow_ratenull
experiment.s_min0.177
experiment.s_max5.179
experiment.total_exposure_timenull
experiment.seccolumnnull
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estimated_volume_methodnull
pddf_softwarenull
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i0_calibration_standardnull
descriptionnull
experiment_descriptionnull
tags[]
intensity_unitarbitrary
experimental_mw10.4
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mw18.75
porod_mw_errornull
pddf_i0null
pddf_i0_errornull
guinier_i05.58446
guinier_i0_errornull
pddf_rgnull
pddf_rg_errornull
guinier_rg1.97
guinier_rg_error0.024
pddf_dmax8.5
pddf_dmax_errornull
porod_volume30.0
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first2
guinier_point_last95
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDWP8_datloglog_img.png
symmetrynull
last_modified2025-03-28T13:52:37.483354+01:00
bragg_peak[]
manifest.json:31 个字段值
字段路径原始值
codeSASDWP8
statussuccess
started_at2026-08-11T15:58:12.301933+00:00
finished_at2026-08-11T15:58:18.128594+00:00
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查看完整 summary.json 原文
{
  "code": "SASDWP8",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/nm",
  "project": {
    "title": "KDSAXS: A tool for Analyzing Binding Equilibria with SAXS Data using Explicit Models",
    "publication": {
      "title": "KDSAXS: A tool for Analyzing Binding Equilibria with SAXS Data using Explicit Models",
      "author_list": "Gomes T, Ruiz L, Martin-Malpartida P, Bernadó P, Baptista A, Macias M, Cordeiro T",
      "journal": "Journal of Molecular Biology",
      "doi": "10.1016/j.jmb.2025.169103",
      "pmid": null,
      "published_date": "2025 Mar"
    },
    "status": "released",
    "submitted_date": "2025-03-02",
    "released_date": "2025-03-28"
  },
  "pddf_data": null,
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          "sequence": "MKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVE\r\nELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLL\r\nFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI",
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  "guinier_rg_error": 0.024,
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  "estimated_volume_error": null,
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  "last_modified": "2025-03-28T13:52:37.483354+01:00",
  "bragg_peak": []
}
查看完整 manifest.json 原文
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  "status": "success",
  "started_at": "2026-08-11T15:58:12.301933+00:00",
  "finished_at": "2026-08-11T15:58:18.128594+00:00",
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