SASDXB7

Entamoeba histolytica Anti-Silencing Function 1 (ASF1) with C terminal His6-tag

数据类型:SASBDB 实验数据 状态:Published 曲线类型:Single concentration 最后更新:2025-11-14T09:57:32.082543+01:00

1. 样品、组分与实验条件 Sample & Experiment

样品 1 · Entamoeba histolytica Anti-Silencing Function 1 (ASF1) with C terminal His6-tag

浓度— – 1.0 缓冲液 / pH20 mM Tris, 150 mM NaCl, and 2 mM β-mercaptoethanol / 7.5
Experimental temperature20.0 设备 / 束线ESRF / BM29
波长0.9794 nm曝光1.0 s × 10

分子组分

组分类型 / OrganismUniProt 与Construct寡聚状态Molecular weight
Anti-Silencing Function 1
查看序列
MASLTKINSLFPNPSTMNDGYSFEIYINVSEQLQEDIGIKVIYVGSSFSNEYDQILEDIAVGPLSVGLNKFTITTGPIDMSKLPDDEILGNTLILISASYKDKEFCRIGYYVNNEFEGIDPTIDVVKREMLVPEKITRTLSEPRVTLFPCYWDKEEHIEMIEEKPEELGRVISFSADGTIQSNETENDNQMEEIQLNPEIKNQIRSALGVDGLMKKQKNMDEDDSEDEMEPMEQLEHHHHHH
proteinEntamoeba histolytica strain HM-1:IMSSC4LX081–234monomer分子数 127.69 kDa

实验曲线

曲线点数 / 列q range误差质量负强度点来源文件
11000[3]0.06285052554875252–5.209716520631418 1/nm含误差列缺失 094sasbdb/entries/b7/sasdxb7/source/SASDXB7.dat

2. SASBDB 报告的指标 Reported Results

指标方法数值误差单位
dmaxP(r)10.09nm
i0Guinier26.58261/cm
i0P(r)25.420.2051/cm
mwExperimental27.68kDa
mwPorod25.11kDa
porod_volumePorod40.27nm³
rgGuinier3.5390.068nm
rgP(r)3.3650.029nm

这些数值是 SASBDB 来源记录,不是 SAXSdb 对实验曲线重新计算的结果。

3. 来源拟合与模型 Source Fits & Models

4. 来源文件索引 Source Files

5. 实验说明与论文 Experiment & Publication

6. 完整来源记录 Complete Source Record

下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;Not declared的单位不会由 SAXSdb 猜测。

打开 SASBDB 原始条目

缓冲液与样品属性

缓冲液名称20 mM Tris, 150 mM NaCl, and 2 mM β-mercaptoethanol缓冲液浓度
pH7.5添加剂
缓冲液说明
纯度测定方法消光系数
吸收值散射对比度
比体积 / 干体积— / —混合物 / 氘代— / —

采集条件与仪器

测量日期2023-10-01储存 / 测量温度4.0 / 20.0
曝光时间1.0帧数10
波长0.9794样品-探测器距离2.867
光源X-ray synchrotron探测器Pilatus3 2M
机构 / 束线ESRF / BM29 · Grenoble, France
q range0.063 – 5.21样品体积 / 流速— / —

SASBDB 原始图

实验 I(q)
实验 I(q)
实验 I(q) log-log
实验 I(q) log-log
Guinier 图
Guinier 图
Kratky 图
Kratky 图
P(r) 图
P(r) 图

可Download文件

类别文件状态大小校验值Download与查看
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full_entry_zipsasbdb/entries/b7/sasdxb7/source/SASDXB7.zipdownloaded17895134018728133b0570fa08f685b892c947a9ae1a2f33e68ce2946f3d6cd28313a7Download查看原文件源站
pddfsasbdb/entries/b7/sasdxb7/source/SASDXB7.outdownloaded426965415a18a0c8fec014e1406750a6332537df220b3b6bea06da14549166ee9c09cDownload查看原文件源站
sascifsasbdb/entries/b7/sasdxb7/source/SASDXB7.sascifnot_availableDownload查看原文件源站
summarysasbdb/entries/b7/sasdxb7/source/summary.jsondownloaded902793cb316404913a60bf95d5ebb184ba17346816e07f7c559deb9d00656100faa2Download查看原文件源站
curve:来源记录
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full_entry_zip:来源记录与 ZIP 内部目录(8 项)
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pddf:来源记录
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sascif:来源记录
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全部来源字段(无筛选)

这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。

summary.json:202 个字段值
字段路径原始值
codeSASDXB7
statusPublished
type_of_curveSingle concentration
angular_unit1/nm
project.titleCharacterisation of Entamoeba histolytica Anti-Silencing Function 1 as a histone chaperone.
project.publication.titleCharacterisation of Entamoeba histolytica Anti-Silencing Function 1 as a histone chaperone.
project.publication.author_listGandhi S, Vasudevan D
project.publication.journalBiochimie
project.publication.doi10.1016/j.biochi.2025.11.003
project.publication.pmid41232797
project.publication.published_date2025 Nov 11
project.statusreleased
project.submitted_date2025-08-04
project.released_date2025-11-14
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experiment.instrument.detector.resolution0.172
experiment.instrument.nameESRF
experiment.instrument.cityGrenoble
experiment.instrument.countryFrance
experiment.instrument.beamline_nameBM29
experiment.instrument.beam_geometrypoint
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
experiment.instrument.line_collimation_slitlengthnull
experiment.instrument.line_collimation_integrationwidthnull
experiment.instrument.xray_energynull
experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameAnti-Silencing Function 1
experiment.sample.molecule[0].short_nameASF1
experiment.sample.molecule[0].sequenceMASLTKINSLFPNPSTMNDGYSFEIYINVSEQLQEDIGIKVIYVGSSFSNEYDQILEDIAVGPLSVGLNKFTITTGPIDMSKLPDDEILGNTLILISASYKDKEFCRIGYYVNNEFEGIDPTIDVVKREMLVPEKITRTLSEPRVTLFPCYWDKEEHIEMIEEKPEELGRVISFSADGTIQSNETENDNQMEEIQLNPEIKNQIRSALGVDGLMKKQKNMDEDDSEDEMEPMEQLEHHHHHH
experiment.sample.molecule[0].organismEntamoeba histolytica strain HM-1:IMSS
experiment.sample.molecule[0].uniprot_codeC4LX08
experiment.sample.molecule[0].uniprot_range_first1
experiment.sample.molecule[0].uniprot_range_last234
experiment.sample.molecule[0].oligomerizationmonomer
experiment.sample.molecule[0].molecular_typeprotein
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experiment.sample.molecule[0].mw27.69
experiment.sample.molecule[0].total_mw27.69
experiment.sample.molecule[0].number_molecules1
experiment.sample.molecule[0].complex_stateFalse
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionAnti-Silencing Function 1 (ASF1) protein from Entamoeba histolytica with hexa-histidine tag
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experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph7.5
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameEntamoeba histolytica Anti-Silencing Function 1 (ASF1) with C terminal His6-tag
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
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experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_namenull
experiment.contributor[0].affiliation[0].addressIndia
experiment.contributor[0].affiliation[0].full_nameInstitute of Life Sciences (ILS)
experiment.contributor[0].affiliation[0].webpagehttps://www.ils.res.in/
experiment.contributor[0].contributor_nameSurajit
experiment.contributor[0].contributor_surnameGandhi
experiment.contributor[0].orcidhttps://orcid.org/0000-0002-8258-2870
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experiment.concentration_unitnull
experiment.date2023-10-01
experiment.storage_temperature4.0
experiment.cell_temperature20.0
experiment.exposure_time1.0
experiment.number_of_frames10
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experiment.sample_volumenull
experiment.flow_ratenull
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experiment.total_exposure_timenull
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tags[]
intensity_unit1/cm
experimental_mw27.68
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mw25.11
porod_mw_errornull
pddf_i025.42
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guinier_i026.5826
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pddf_rg_error0.029
guinier_rg3.539
guinier_rg_error0.068
pddf_dmax10.09
pddf_dmax_errornull
porod_volume40.27
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first13
guinier_point_last59
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDXB7_datloglog_img.png
symmetrynull
last_modified2025-11-14T09:57:32.082543+01:00
bragg_peak[]
manifest.json:34 个字段值
字段路径原始值
codeSASDXB7
statussuccess
started_at2026-08-11T16:26:50.827628+00:00
finished_at2026-08-11T16:26:59.112483+00:00
source_last_modified2025-11-14T09:57:32.082543+01:00
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查看完整 summary.json 原文
{
  "code": "SASDXB7",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/nm",
  "project": {
    "title": "Characterisation of Entamoeba histolytica Anti-Silencing Function 1 as a histone chaperone.",
    "publication": {
      "title": "Characterisation of Entamoeba histolytica Anti-Silencing Function 1 as a histone chaperone.",
      "author_list": "Gandhi S, Vasudevan D",
      "journal": "Biochimie",
      "doi": "10.1016/j.biochi.2025.11.003",
      "pmid": "41232797",
      "published_date": "2025 Nov 11"
    },
    "status": "released",
    "submitted_date": "2025-08-04",
    "released_date": "2025-11-14"
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查看完整 manifest.json 原文
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