SASDXH6

Adenylate Cyclase Toxine proCyaA

数据类型:SASBDB 实验数据 状态:Published 曲线类型:Merged 最后更新:2026-07-16T15:14:26.862129+02:00

1. 样品、组分与实验条件 Sample & Experiment

样品 1 · Adenylate Cyclase Toxine proCyaA

浓度0.95 – 2.86 缓冲液 / pH20mM HEPES , 50mM NaCl, 2mM CaCl2 / 7.4
Experimental temperature15.0 设备 / 束线SOLEIL / SWING
波长0.1033 nm曝光0.99 s × 20

分子组分

组分类型 / OrganismUniProt 与Construct寡聚状态Molecular weight
Adenylate cyclase Toxin
查看序列
>SP|P0DKX7|CYAA_BORPEBIFUNCTIONALHEMOLYSIN/ADENYLATECYCLASEOS=BORDETELLAPERTUSSIS(STRAINTOHAMAI/ATCCBAA-589/NCTC13251)OX=257313GN=CYAPE=1SV=1MQQSHQAGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGLGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERLDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNAAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRAASEATGGLDRERIDLLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGTEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDDGLGAAPGVPSGRSKFSPDVLETVPASPGLRRPSLGAVERQDSGYDSLDGVGSRSFSLGEVSDMAAVEAAELEMTRQVLHAGARQDDAEPGVSGASAHWGQRALQGAQAVAAAQRLVHAIALMTQFGRAGSTNTPQEAASLSAAVFGLGEASSAVAETVSGFFRGSSRWAGGFGVAGGAMALGGGIAAAVGAGMSLTDDAPAGQKAAAGAEIALQLTGGTVELASSIALALAAARGVTSGLQVAGASAGAAAGALAAALSPMEIYGLVQQSHYADQLDKLAQESSAYGYEGDALLAQLYRDKTAAEGAVAGVSAVLSTVGAAVSIAAAASVVGAPVAVVTSLLTGALNGILRGVQQPIIEKLANDYARKIDELGGPQAYFEKNLQARHEQLANSDGLRKMLADLQAGWNASSVIGVQTTEISKSALELAAITGNADNLKSVDVFVDRFVQGERVAGQPVVLDVAAGGIDIASRKGERPALTFITPLAAPGEEQRRRTKTGKSEFTTFVEIVGKQDRWRIRDGAADTTIDLAKVVSQLVDANGVLKHSIKLDVIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNVRKQLNNANVYREGVATQTTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGHDTIYESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPDPGAAAAAPPAARVPDTLMQSLAVNWR
proteinEscherichia coliP0DKX7—–—monomer分子数 1177.59 kDa

实验曲线

曲线点数 / 列q range误差质量负强度点来源文件
11083[3]0.008665791–0.4999795 1/A含误差列缺失 0293sasbdb/entries/h6/sasdxh6/source/SASDXH6.dat

2. SASBDB 报告的指标 Reported Results

指标方法数值误差单位
dmaxP(r)17.5Å
i0Guinier0.02454981/cm
i0P(r)0.023921/cm
mwExperimental177.187kDa
mwPorod190.0kDa
porod_volumePorod305.0ų
rgGuinier4.8650.945Å
rgP(r)4.730.7Å

这些数值是 SASBDB 来源记录,不是 SAXSdb 对实验曲线重新计算的结果。

3. 来源拟合与模型 Source Fits & Models

拟合 2 · Pepsi-SAXS 2.6

χ²:1.5392CorMap p:0.0单位:1/A
模型名称 / 类型软件Symmetry模型 MWPDB 声明来源文件
1atomicAlphaFold 2.2177.4模型 图片

4. 来源文件索引 Source Files

5. 实验说明与论文 Experiment & Publication

6. 完整来源记录 Complete Source Record

下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;Not declared的单位不会由 SAXSdb 猜测。

打开 SASBDB 原始条目

缓冲液与样品属性

缓冲液名称20mM HEPES , 50mM NaCl, 2mM CaCl2缓冲液浓度
pH7.4添加剂
缓冲液说明
纯度测定方法消光系数
吸收值散射对比度
比体积 / 干体积— / —混合物 / 氘代— / —

采集条件与仪器

测量日期2023-11-23储存 / 测量温度4.0 / 15.0
曝光时间0.99帧数20
波长0.1033样品-探测器距离4.0
光源X-ray synchrotron探测器Eiger 4M
机构 / 束线SOLEIL / SWING · Saint-Aubin, France
q range0.087 – 5.0样品体积 / 流速— / —

SASBDB 原始图

实验 I(q)
实验 I(q)
实验 I(q) log-log
实验 I(q) log-log
Guinier 图
Guinier 图
Kratky 图
Kratky 图
P(r) 图
P(r) 图

可Download文件

类别文件状态大小校验值Download与查看
curvesasbdb/entries/h6/sasdxh6/source/SASDXH6.datdownloaded5297419e783de090242ae12663afddc1ecac8bc505094860cdde351b84dd4ab44734dDownload查看原文件源站
full_entry_zipsasbdb/entries/h6/sasdxh6/source/SASDXH6.zipdownloaded505653ac979b972614477e56bd00f50f6e564a84e1f92e73a882f0a88c3b238a9ce02bDownload查看原文件源站
pddfsasbdb/entries/h6/sasdxh6/source/SASDXH6.outdownloaded97153de04528cc1af617a87dc848ba80d195b8dfad4b5803b2c5641a452b235fd6049Download查看原文件源站
sascifsasbdb/entries/h6/sasdxh6/source/SASDXH6.sascifnot_availableDownload查看原文件源站
summarysasbdb/entries/h6/sasdxh6/source/summary.jsondownloaded10809f85047107ae6830502a9a9f1390905d3c79753f6f7ecc7cb2707489d42fa44a9Download查看原文件源站
curve:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.dat",
  "role": "curve",
  "sha256": "19e783de090242ae12663afddc1ecac8bc505094860cdde351b84dd4ab44734d",
  "size": 52974,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/intensities_files/SASDXH6.dat"
}
full_entry_zip:来源记录与 ZIP 内部目录(6 项)
{
  "path": "/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.zip",
  "role": "full_entry_zip",
  "sha256": "ac979b972614477e56bd00f50f6e564a84e1f92e73a882f0a88c3b238a9ce02b",
  "size": 505653,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/zip_directories/SASDXH6.zip",
  "zip_member_count": 6,
  "zip_members": [
    {
      "crc32": "79ac6725",
      "name": "SASDXH6/experimental_data/SASDXH6.dat",
      "size": 52974
    },
    {
      "crc32": "9afe19a5",
      "name": "SASDXH6/pddf/SASDXH6.out",
      "size": 97153
    },
    {
      "crc32": "0a2380da",
      "name": "SASDXH6/SASDXH6_fit1.fit",
      "size": 86344
    },
    {
      "crc32": "5c58b018",
      "name": "SASDXH6/SASDXH6_fit1_model1.pdb",
      "size": 1012815
    },
    {
      "crc32": "cfc79dba",
      "name": "SASDXH6/SASDXH6_fit2.fit",
      "size": 79741
    },
    {
      "crc32": "855e5839",
      "name": "SASDXH6/SASDXH6_fit2_model1.pdb",
      "size": 1012793
    }
  ],
  "zip_validation": "central_directory_readable"
}
pddf:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.out",
  "role": "pddf",
  "sha256": "de04528cc1af617a87dc848ba80d195b8dfad4b5803b2c5641a452b235fd6049",
  "size": 97153,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/p_of_R_files/SASDXH6.out"
}
sascif:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.sascif",
  "role": "sascif",
  "status": "not_available",
  "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDXH6.sascif"
}
summary:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/summary.json",
  "sha256": "f85047107ae6830502a9a9f1390905d3c79753f6f7ecc7cb2707489d42fa44a9",
  "size": 10809,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDXH6/"
}

全部来源字段(无筛选)

这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。

summary.json:174 个字段值
字段路径原始值
codeSASDXH6
statusPublished
type_of_curveMerged
angular_unit1/A
project.titlePost-translational acylation drives folding and activity of the CyaA bacterial toxin
project.publicationnull
project.statusreleased
project.submitted_date2025-07-16
project.released_date2026-07-16
pddf_datahttps://www.sasbdb.org/media/p_of_R_files/SASDXH6.out
intensities_datahttps://www.sasbdb.org/media/intensities_files/SASDXH6.dat
intensities_log_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDXH6_dat_img.png
intensities_kratky_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDXH6_kratky_img.png
pddf_plothttps://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDXH6_pofr_img.png
intensities_guinier_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDXH6_guinier_img.png
sascif_datahttps://www.sasbdb.org/media/sascif/sascif_files/SASDXH6.sascif
experiment.instrument.detector.typenull
experiment.instrument.detector.nameEiger 4M
experiment.instrument.detector.resolution75.0
experiment.instrument.nameSOLEIL
experiment.instrument.citySaint-Aubin
experiment.instrument.countryFrance
experiment.instrument.beamline_nameSWING
experiment.instrument.beam_geometrynull
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
experiment.instrument.line_collimation_slitlengthnull
experiment.instrument.line_collimation_integrationwidthnull
experiment.instrument.xray_energynull
experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameAdenylate cyclase Toxin
experiment.sample.molecule[0].short_nameCyaA
experiment.sample.molecule[0].sequence>sp|P0DKX7|CYAA_BORPE Bifunctional hemolysin/adenylate cyclase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) OX=257313 GN=cya PE=1 SV=1 MQQSHQAGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGL GVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERL DYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNA AGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRAASEATGGLDRERIDL LWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGT EQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDD GLGAAPGVPSGRSKFSPDVLETVPASPGLRRPSLGAVERQDSGYDSLDGVGSRSFSLGEV SDMAAVEAAELEMTRQVLHAGARQDDAEPGVSGASAHWGQRALQGAQAVAAAQRLVHAIA LMTQFGRAGSTNTPQEAASLSAAVFGLGEASSAVAETVSGFFRGSSRWAGGFGVAGGAMA LGGGIAAAVGAGMSLTDDAPAGQKAAAGAEIALQLTGGTVELASSIALALAAARGVTSGL QVAGASAGAAAGALAAALSPMEIYGLVQQSHYADQLDKLAQESSAYGYEGDALLAQLYRD KTAAEGAVAGVSAVLSTVGAAVSIAAAASVVGAPVAVVTSLLTGALNGILRGVQQPIIEK LANDYARKIDELGGPQAYFEKNLQARHEQLANSDGLRKMLADLQAGWNASSVIGVQTTEI SKSALELAAITGNADNLKSVDVFVDRFVQGERVAGQPVVLDVAAGGIDIASRKGERPALT FITPLAAPGEEQRRRTKTGKSEFTTFVEIVGKQDRWRIRDGAADTTIDLAKVVSQLVDAN GVLKHSIKLDVIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNV RKQLNNANVYREGVATQTTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGND SITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDG GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSR LNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETVSDD IDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNVRNVENV IGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGD DTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILADLGAGR VDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLGG DGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKGV FLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGD DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGHDTIYESGGGHDTIRINAGADQL WFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD PGAAAAAPPAARVPDTLMQSLAVNWR
experiment.sample.molecule[0].organismEscherichia coli
experiment.sample.molecule[0].uniprot_codeP0DKX7
experiment.sample.molecule[0].uniprot_range_firstnull
experiment.sample.molecule[0].uniprot_range_lastnull
experiment.sample.molecule[0].oligomerizationmonomer
experiment.sample.molecule[0].molecular_typeprotein
experiment.sample.molecule[0].uniprot_sequenceMQQSHQAGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGL GVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERL DYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNA AGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRAASEATGGLDRERIDL LWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGT EQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDD GLGAAPGVPSGRSKFSPDVLETVPASPGLRRPSLGAVERQDSGYDSLDGVGSRSFSLGEV SDMAAVEAAELEMTRQVLHAGARQDDAEPGVSGASAHWGQRALQGAQAVAAAQRLVHAIA LMTQFGRAGSTNTPQEAASLSAAVFGLGEASSAVAETVSGFFRGSSRWAGGFGVAGGAMA LGGGIAAAVGAGMSLTDDAPAGQKAAAGAEIALQLTGGTVELASSIALALAAARGVTSGL QVAGASAGAAAGALAAALSPMEIYGLVQQSHYADQLDKLAQESSAYGYEGDALLAQLYRD KTAAEGAVAGVSAVLSTVGAAVSIAAAASVVGAPVAVVTSLLTGALNGILRGVQQPIIEK LANDYARKIDELGGPQAYFEKNLQARHEQLANSDGLRKMLADLQAGWNASSVIGVQTTEI SKSALELAAITGNADNLKSVDVFVDRFVQGERVAGQPVVLDVAAGGIDIASRKGERPALT FITPLAAPGEEQRRRTKTGKSEFTTFVEIVGKQDRWRIRDGAADTTIDLAKVVSQLVDAN GVLKHSIKLDVIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNV RKQLNNANVYREGVATQTTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGND SITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDG GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSR LNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETVSDD IDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNVRNVENV IGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGD DTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILADLGAGR VDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLGG DGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKGV FLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGD DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGHDTIYESGGGHDTIRINAGADQL WFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD PGAAAAAPPAARVPDTLMQSLAVNWR
experiment.sample.molecule[0].mw177.59
experiment.sample.molecule[0].total_mw177.59
experiment.sample.molecule[0].number_molecules1
experiment.sample.molecule[0].complex_stateFalse
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionAdenylate cyclase toxin that plays a crucial role in host colonization (PubMed:2050107, PubMed:2542030). It causes whooping cough by acting on mammalian cells by elevating cAMP-concentration and thus disrupts normal cell function (PubMed:2050107, PubMed:2542030).
experiment.sample.buffer.name20mM HEPES , 50mM NaCl, 2mM CaCl2
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph7.4
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameAdenylate Cyclase Toxine proCyaA
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_namenull
experiment.contributor[0].affiliation[0].addressnull
experiment.contributor[0].affiliation[0].full_nameInstitut Pasteur
experiment.contributor[0].affiliation[0].webpagenull
experiment.contributor[0].contributor_nameCorentin
experiment.contributor[0].contributor_surnameLéger
experiment.contributor[0].orcid
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2023-11-23
experiment.storage_temperature4.0
experiment.cell_temperature15.0
experiment.exposure_time0.99
experiment.number_of_frames20
experiment.wavelength0.1033
experiment.sample_detector_distance4.0
experiment.concentration_min0.95
experiment.concentration_max2.86
experiment.sample_volumenull
experiment.flow_ratenull
experiment.s_min0.087
experiment.s_max5.0
experiment.total_exposure_timenull
experiment.seccolumnnull
fits[0].models[0].model_plothttps://www.sasbdb.org/media/pdb_file/images/SASDXH6_fit1_model1_img.png
fits[0].models[0].softwareGROMACS
fits[0].models[0].pdb_link[]
fits[0].models[0].model_titlenull
fits[0].models[0].type_of_modelatomic
fits[0].models[0].software_versionnull
fits[0].models[0].model_datahttps://www.sasbdb.org/media/pdb_file/SASDXH6_fit1_model1.pdb
fits[0].models[0].model_mw177.4
fits[0].models[0].bead_radiusnull
fits[0].models[0].lognull
fits[0].models[0].symmetrynull
fits[0].models[0].commentnull
fits[0].models[0].user755
fits[0].fit_unit1/A
fits[0].fit_plothttps://www.sasbdb.org/media/fitting_files/scattering_plots/SASDXH6_fit1_fixed_fit_img.png
fits[0].softwarePepsi-SAXS
fits[0].chi_square_value1.729
fits[0].p_value0.0
fits[0].fit_residual_plotSASDXH6_fit1_fitresiduals_img.png
fits[0].fit_datahttps://www.sasbdb.org/media/fitting_files/SASDXH6_fit1.fit
fits[0].fit_lognull
fits[0].software_version2.6
fits[0].description
fits[1].models[0].model_plothttps://www.sasbdb.org/media/pdb_file/images/SASDXH6_fit2_model1_img.png
fits[1].models[0].softwareAlphaFold
fits[1].models[0].pdb_link[]
fits[1].models[0].model_titlenull
fits[1].models[0].type_of_modelatomic
fits[1].models[0].software_version2.2
fits[1].models[0].model_datahttps://www.sasbdb.org/media/pdb_file/SASDXH6_fit2_model1.pdb
fits[1].models[0].model_mw177.4
fits[1].models[0].bead_radiusnull
fits[1].models[0].lognull
fits[1].models[0].symmetrynull
fits[1].models[0].commentnull
fits[1].models[0].user755
fits[1].fit_unit1/A
fits[1].fit_plothttps://www.sasbdb.org/media/fitting_files/scattering_plots/SASDXH6_fit2_fixed_fit_img.png
fits[1].softwarePepsi-SAXS
fits[1].chi_square_value1.5392
fits[1].p_value0.0
fits[1].fit_residual_plotSASDXH6_fit2_fitresiduals_img.png
fits[1].fit_datahttps://www.sasbdb.org/media/fitting_files/SASDXH6_fit2.fit
fits[1].fit_lognull
fits[1].software_version2.6
fits[1].description
estimated_volume_methodnull
pddf_softwareATSAS GNOM
pddf_software_version5.0
i0_calibration_standardnull
descriptionnull
experiment_descriptionnull
tags[]
intensity_unit1/cm
experimental_mw177.187
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mw190.0
porod_mw_errornull
pddf_i00.02392
pddf_i0_errornull
guinier_i00.0245498
guinier_i0_errornull
pddf_rg4.73
pddf_rg_error0.7
guinier_rg4.865
guinier_rg_error0.945
pddf_dmax17.5
pddf_dmax_errornull
porod_volume305.0
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first1
guinier_point_last40
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDXH6_datloglog_img.png
symmetrynull
last_modified2026-07-16T15:14:26.862129+02:00
bragg_peak[]
manifest.json:34 个字段值
字段路径原始值
codeSASDXH6
statussuccess
started_at2026-08-11T16:26:16.386574+00:00
finished_at2026-08-11T16:26:29.442170+00:00
source_last_modified2026-07-16T15:14:26.862129+02:00
files[0].statusdownloaded
files[0].urlhttps://www.sasbdb.org/rest-api/entry/summary/SASDXH6/
files[0].path/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/summary.json
files[0].size10809
files[0].sha256f85047107ae6830502a9a9f1390905d3c79753f6f7ecc7cb2707489d42fa44a9
files[1].statusdownloaded
files[1].urlhttps://www.sasbdb.org/media/intensities_files/SASDXH6.dat
files[1].path/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.dat
files[1].size52974
files[1].sha25619e783de090242ae12663afddc1ecac8bc505094860cdde351b84dd4ab44734d
files[1].rolecurve
files[2].statusdownloaded
files[2].urlhttps://www.sasbdb.org/media/p_of_R_files/SASDXH6.out
files[2].path/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.out
files[2].size97153
files[2].sha256de04528cc1af617a87dc848ba80d195b8dfad4b5803b2c5641a452b235fd6049
files[2].rolepddf
files[3].statusnot_available
files[3].urlhttps://www.sasbdb.org/media/sascif/sascif_files/SASDXH6.sascif
files[3].path/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.sascif
files[3].rolesascif
files[4].statusdownloaded
files[4].urlhttps://www.sasbdb.org/media/zip_directories/SASDXH6.zip
files[4].path/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.zip
files[4].size505653
files[4].sha256ac979b972614477e56bd00f50f6e564a84e1f92e73a882f0a88c3b238a9ce02b
files[4].rolefull_entry_zip
files[4].zip_member_count6
files[4].zip_validationcentral_directory_readable
查看完整 summary.json 原文
{
  "code": "SASDXH6",
  "status": "Published",
  "type_of_curve": "Merged",
  "angular_unit": "1/A",
  "project": {
    "title": "Post-translational acylation drives folding and activity of the CyaA bacterial toxin",
    "publication": null,
    "status": "released",
    "submitted_date": "2025-07-16",
    "released_date": "2026-07-16"
  },
  "pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDXH6.out",
  "intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDXH6.dat",
  "intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDXH6_dat_img.png",
  "intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDXH6_kratky_img.png",
  "pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDXH6_pofr_img.png",
  "intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDXH6_guinier_img.png",
  "sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDXH6.sascif",
  "experiment": {
    "instrument": {
      "detector": {
        "type": null,
        "name": "Eiger 4M",
        "resolution": 75.0
      },
      "name": "SOLEIL",
      "city": "Saint-Aubin",
      "country": "France",
      "beamline_name": "SWING",
      "beam_geometry": null,
      "type_of_source": "X-ray synchrotron",
      "point_source": null,
      "line_collimation": null,
      "sample_path_length": null,
      "line_collimation_slitlength": null,
      "line_collimation_integrationwidth": null,
      "xray_energy": null,
      "beam_profile_ah": null,
      "beam_profile_al": null
    },
    "sample": {
      "molecule": [
        {
          "long_name": "Adenylate cyclase Toxin",
          "short_name": "CyaA",
          "sequence": ">sp|P0DKX7|CYAA_BORPE Bifunctional hemolysin/adenylate cyclase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) OX=257313 GN=cya PE=1 SV=1\r\nMQQSHQAGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGL\r\nGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERL\r\nDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNA\r\nAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRAASEATGGLDRERIDL\r\nLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGT\r\nEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDD\r\nGLGAAPGVPSGRSKFSPDVLETVPASPGLRRPSLGAVERQDSGYDSLDGVGSRSFSLGEV\r\nSDMAAVEAAELEMTRQVLHAGARQDDAEPGVSGASAHWGQRALQGAQAVAAAQRLVHAIA\r\nLMTQFGRAGSTNTPQEAASLSAAVFGLGEASSAVAETVSGFFRGSSRWAGGFGVAGGAMA\r\nLGGGIAAAVGAGMSLTDDAPAGQKAAAGAEIALQLTGGTVELASSIALALAAARGVTSGL\r\nQVAGASAGAAAGALAAALSPMEIYGLVQQSHYADQLDKLAQESSAYGYEGDALLAQLYRD\r\nKTAAEGAVAGVSAVLSTVGAAVSIAAAASVVGAPVAVVTSLLTGALNGILRGVQQPIIEK\r\nLANDYARKIDELGGPQAYFEKNLQARHEQLANSDGLRKMLADLQAGWNASSVIGVQTTEI\r\nSKSALELAAITGNADNLKSVDVFVDRFVQGERVAGQPVVLDVAAGGIDIASRKGERPALT\r\nFITPLAAPGEEQRRRTKTGKSEFTTFVEIVGKQDRWRIRDGAADTTIDLAKVVSQLVDAN\r\nGVLKHSIKLDVIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNV\r\nRKQLNNANVYREGVATQTTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGND\r\nSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDG\r\nGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSR\r\nLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETVSDD\r\nIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNVRNVENV\r\nIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGD\r\nDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILADLGAGR\r\nVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLGG\r\nDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKGV\r\nFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGD\r\nDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGHDTIYESGGGHDTIRINAGADQL\r\nWFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD\r\nPGAAAAAPPAARVPDTLMQSLAVNWR",
          "organism": "Escherichia coli",
          "uniprot_code": "P0DKX7",
          "uniprot_range_first": null,
          "uniprot_range_last": null,
          "oligomerization": "monomer",
          "molecular_type": "protein",
          "uniprot_sequence": "MQQSHQAGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGL\nGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERL\nDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNA\nAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRAASEATGGLDRERIDL\nLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGT\nEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDD\nGLGAAPGVPSGRSKFSPDVLETVPASPGLRRPSLGAVERQDSGYDSLDGVGSRSFSLGEV\nSDMAAVEAAELEMTRQVLHAGARQDDAEPGVSGASAHWGQRALQGAQAVAAAQRLVHAIA\nLMTQFGRAGSTNTPQEAASLSAAVFGLGEASSAVAETVSGFFRGSSRWAGGFGVAGGAMA\nLGGGIAAAVGAGMSLTDDAPAGQKAAAGAEIALQLTGGTVELASSIALALAAARGVTSGL\nQVAGASAGAAAGALAAALSPMEIYGLVQQSHYADQLDKLAQESSAYGYEGDALLAQLYRD\nKTAAEGAVAGVSAVLSTVGAAVSIAAAASVVGAPVAVVTSLLTGALNGILRGVQQPIIEK\nLANDYARKIDELGGPQAYFEKNLQARHEQLANSDGLRKMLADLQAGWNASSVIGVQTTEI\nSKSALELAAITGNADNLKSVDVFVDRFVQGERVAGQPVVLDVAAGGIDIASRKGERPALT\nFITPLAAPGEEQRRRTKTGKSEFTTFVEIVGKQDRWRIRDGAADTTIDLAKVVSQLVDAN\nGVLKHSIKLDVIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNV\nRKQLNNANVYREGVATQTTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGND\nSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDG\nGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSR\nLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETVSDD\nIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNVRNVENV\nIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGD\nDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILADLGAGR\nVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLGG\nDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKGV\nFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGD\nDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGHDTIYESGGGHDTIRINAGADQL\nWFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD\nPGAAAAAPPAARVPDTLMQSLAVNWR",
          "mw": 177.59,
          "total_mw": 177.59,
          "number_molecules": 1,
          "complex_state": false,
          "deuteration": null,
          "molecule_source": "biological",
          "molecule_description": "Adenylate cyclase toxin that plays a crucial role in host colonization (PubMed:2050107, PubMed:2542030).\r\nIt causes whooping cough by acting on mammalian cells by elevating cAMP-concentration and thus disrupts normal cell function (PubMed:2050107, PubMed:2542030)."
        }
      ],
      "buffer": {
        "name": "20mM HEPES , 50mM NaCl, 2mM CaCl2",
        "concentration_unit": null,
        "comment": null,
        "additive": null,
        "concentration": null,
        "pka": null,
        "ph": 7.4,
        "deuteration": null
      },
      "purity_method": null,
      "name": "Adenylate Cyclase Toxine proCyaA",
      "ext_coefficient": null,
      "contrast": null,
      "specific_vol": null,
      "dry_vol": null,
      "absorbption": null,
      "deuteration": null,
      "mixture": null
    },
    "contributor": [
      {
        "affiliation": [
          {
            "short_name": null,
            "address": null,
            "full_name": "Institut Pasteur",
            "webpage": null
          }
        ],
        "contributor_name": "Corentin",
        "contributor_surname": "Léger",
        "orcid": ""
      }
    ],
    "concentration_method": null,
    "concentration_unit": null,
    "date": "2023-11-23",
    "storage_temperature": 4.0,
    "cell_temperature": 15.0,
    "exposure_time": 0.99,
    "number_of_frames": 20,
    "wavelength": 0.1033,
    "sample_detector_distance": 4.0,
    "concentration_min": 0.95,
    "concentration_max": 2.86,
    "sample_volume": null,
    "flow_rate": null,
    "s_min": 0.087,
    "s_max": 5.0,
    "total_exposure_time": null,
    "seccolumn": null
  },
  "fits": [
    {
      "models": [
        {
          "model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDXH6_fit1_model1_img.png",
          "software": "GROMACS",
          "pdb_link": [],
          "model_title": null,
          "type_of_model": "atomic",
          "software_version": null,
          "model_data": "https://www.sasbdb.org/media/pdb_file/SASDXH6_fit1_model1.pdb",
          "model_mw": 177.4,
          "bead_radius": null,
          "log": null,
          "symmetry": null,
          "comment": null,
          "user": 755
        }
      ],
      "fit_unit": "1/A",
      "fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDXH6_fit1_fixed_fit_img.png",
      "software": "Pepsi-SAXS",
      "chi_square_value": 1.729,
      "p_value": 0.0,
      "fit_residual_plot": "SASDXH6_fit1_fitresiduals_img.png",
      "fit_data": "https://www.sasbdb.org/media/fitting_files/SASDXH6_fit1.fit",
      "fit_log": null,
      "software_version": "2.6",
      "description": ""
    },
    {
      "models": [
        {
          "model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDXH6_fit2_model1_img.png",
          "software": "AlphaFold",
          "pdb_link": [],
          "model_title": null,
          "type_of_model": "atomic",
          "software_version": "2.2",
          "model_data": "https://www.sasbdb.org/media/pdb_file/SASDXH6_fit2_model1.pdb",
          "model_mw": 177.4,
          "bead_radius": null,
          "log": null,
          "symmetry": null,
          "comment": null,
          "user": 755
        }
      ],
      "fit_unit": "1/A",
      "fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDXH6_fit2_fixed_fit_img.png",
      "software": "Pepsi-SAXS",
      "chi_square_value": 1.5392,
      "p_value": 0.0,
      "fit_residual_plot": "SASDXH6_fit2_fitresiduals_img.png",
      "fit_data": "https://www.sasbdb.org/media/fitting_files/SASDXH6_fit2.fit",
      "fit_log": null,
      "software_version": "2.6",
      "description": ""
    }
  ],
  "estimated_volume_method": null,
  "pddf_software": "ATSAS GNOM",
  "pddf_software_version": "5.0",
  "i0_calibration_standard": null,
  "description": null,
  "experiment_description": null,
  "tags": [],
  "intensity_unit": "1/cm",
  "experimental_mw": 177.187,
  "experimental_mw_error": null,
  "guinier_i0_mw": null,
  "guinier_i0_mw_error": null,
  "porod_mw": 190.0,
  "porod_mw_error": null,
  "pddf_i0": 0.02392,
  "pddf_i0_error": null,
  "guinier_i0": 0.0245498,
  "guinier_i0_error": null,
  "pddf_rg": 4.73,
  "pddf_rg_error": 0.7,
  "guinier_rg": 4.865,
  "guinier_rg_error": 0.945,
  "pddf_dmax": 17.5,
  "pddf_dmax_error": null,
  "porod_volume": 305.0,
  "porod_volume_error": null,
  "estimated_volume": null,
  "estimated_volume_error": null,
  "guinier_point_first": 1,
  "guinier_point_last": 40,
  "pddf_point_first": null,
  "pddf_point_last": null,
  "i0_calibration_standard_data": null,
  "intensities_log_log_plot": "SASDXH6_datloglog_img.png",
  "symmetry": null,
  "last_modified": "2026-07-16T15:14:26.862129+02:00",
  "bragg_peak": []
}
查看完整 manifest.json 原文
{
  "code": "SASDXH6",
  "status": "success",
  "started_at": "2026-08-11T16:26:16.386574+00:00",
  "finished_at": "2026-08-11T16:26:29.442170+00:00",
  "source_last_modified": "2026-07-16T15:14:26.862129+02:00",
  "files": [
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDXH6/",
      "path": "/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/summary.json",
      "size": 10809,
      "sha256": "f85047107ae6830502a9a9f1390905d3c79753f6f7ecc7cb2707489d42fa44a9"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/intensities_files/SASDXH6.dat",
      "path": "/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.dat",
      "size": 52974,
      "sha256": "19e783de090242ae12663afddc1ecac8bc505094860cdde351b84dd4ab44734d",
      "role": "curve"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/p_of_R_files/SASDXH6.out",
      "path": "/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.out",
      "size": 97153,
      "sha256": "de04528cc1af617a87dc848ba80d195b8dfad4b5803b2c5641a452b235fd6049",
      "role": "pddf"
    },
    {
      "status": "not_available",
      "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDXH6.sascif",
      "path": "/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.sascif",
      "role": "sascif"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/zip_directories/SASDXH6.zip",
      "path": "/data/saxsdb/sasbdb/entries/h6/sasdxh6/source/SASDXH6.zip",
      "size": 505653,
      "sha256": "ac979b972614477e56bd00f50f6e564a84e1f92e73a882f0a88c3b238a9ce02b",
      "role": "full_entry_zip",
      "zip_member_count": 6,
      "zip_validation": "central_directory_readable"
    }
  ]
}