下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;Not declared的单位不会由 SAXSdb 猜测。
打开 SASBDB 原始条目
缓冲液与样品属性
采集条件与仪器
SASBDB 原始图
实验 I(q)
实验 I(q) log-log
Guinier 图
Kratky 图
可Download文件
curve:来源记录
{
"path": "/data/saxsdb/sasbdb/entries/r5/sasdxr5/source/SASDXR5.dat",
"role": "curve",
"sha256": "da43aa7caf7a8aa48e680a23cce04daf665d208fe6f474b81d722cc33be4c712",
"size": 25793,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDXR5.dat"
}full_entry_zip:来源记录与 ZIP 内部目录(1 项)
{
"path": "/data/saxsdb/sasbdb/entries/r5/sasdxr5/source/SASDXR5.zip",
"role": "full_entry_zip",
"sha256": "c526481c4764f0046a98a956b6db8cfce26915a25aff9503696dbca410e9f7f6",
"size": 8010,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDXR5.zip",
"zip_member_count": 1,
"zip_members": [
{
"crc32": "e93c6d82",
"name": "SASDXR5/experimental_data/SASDXR5.dat",
"size": 25793
}
],
"zip_validation": "central_directory_readable"
}pddf:来源记录
{
"path": "/data/saxsdb/sasbdb/entries/r5/sasdxr5/source/SASDXR5.out",
"role": "pddf",
"status": "not_listed"
}sascif:来源记录
{
"path": "/data/saxsdb/sasbdb/entries/r5/sasdxr5/source/SASDXR5.sascif",
"role": "sascif",
"status": "not_available",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDXR5.sascif"
}summary:来源记录
{
"path": "/data/saxsdb/sasbdb/entries/r5/sasdxr5/source/summary.json",
"sha256": "2b7225bab7ba075759a770153a8a5076bc7feabbbbe52c81b060f288b8651c25",
"size": 5984,
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDXR5/"
}
全部来源字段(无筛选)
这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。
summary.json:129 个字段值
manifest.json:31 个字段值
查看完整 summary.json 原文
{
"code": "SASDXR5",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/A",
"project": {
"title": "A domain-swapped CaMKII conformation facilitates linker-mediated allosteric regulation - revision",
"publication": null,
"status": "released",
"submitted_date": "2025-07-01",
"released_date": "2025-09-03"
},
"pddf_data": null,
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDXR5.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDXR5_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDXR5_kratky_img.png",
"pddf_plot": null,
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDXR5_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDXR5.sascif",
"experiment": {
"instrument": {
"detector": {
"type": "Reverse-biased silicon diode array",
"name": "DECTRIS/ PILATUS 100K",
"resolution": 172.0
},
"name": "Institute for Applied Life Sciences/Biophysical Characterization",
"city": "Amherst",
"country": "United States",
"beamline_name": "Rigaku/BioSAXS-2000 SAXS",
"beam_geometry": null,
"type_of_source": "X-ray in house",
"point_source": null,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "Calcium/calmodulin-dependent protein kinase type II subunit alpha (Δ1-6; Q223K; Δ 316-329)",
"short_name": "CaMKII Exon 18",
"sequence": "TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYKQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSESSESTNTTIEDEDTKVRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKWQIVHFHRSGAPSVLPH",
"organism": "Homo sapiens",
"uniprot_code": "Q9UQM7",
"uniprot_range_first": 7,
"uniprot_range_last": 478,
"oligomerization": "dodecamer",
"molecular_type": "protein",
"uniprot_sequence": "MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLERE\nARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL\nEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYL\nSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV\nTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK\nGAILTTMLATRNFSGGKSGGNKKSDGVKESSESTNTTIEDEDTKVRKQEIIKVTEQLIEA\nISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIH\nLMGDESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKWQIVHFHRSGAPSVLPH",
"mw": 52.166,
"total_mw": 625.992,
"number_molecules": 12,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": "The linker region only contains exon 18."
}
],
"buffer": {
"name": "50 mM Tris , 0.2 mM CaCl2, 150 mM KCl, 10 mM MgCl2, 2 mM ATP",
"concentration_unit": null,
"comment": "no caM",
"additive": null,
"concentration": null,
"pka": null,
"ph": 8.0,
"deuteration": null
},
"purity_method": null,
"name": "Calcium/calmodulin-dependent protein kinase type II (CaMKII) subunit holoenzyme with Exon 18 as the linker region + 1000 nM Ca2+/CaM",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": null,
"full_name": "university of massachusetts amherst",
"webpage": null
}
],
"contributor_name": "Bao",
"contributor_surname": "Nguyen Viet",
"orcid": ""
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2024-12-18",
"storage_temperature": 10.0,
"cell_temperature": 22.0,
"exposure_time": 600.0,
"number_of_frames": 1,
"wavelength": 0.154,
"sample_detector_distance": 0.4389,
"concentration_min": null,
"concentration_max": 1.5,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.066,
"s_max": 6.962,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [],
"estimated_volume_method": null,
"pddf_software": null,
"pddf_software_version": null,
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [],
"intensity_unit": "arbitrary",
"experimental_mw": 676.3,
"experimental_mw_error": null,
"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": null,
"porod_mw_error": null,
"pddf_i0": null,
"pddf_i0_error": null,
"guinier_i0": 3.37255,
"guinier_i0_error": null,
"pddf_rg": null,
"pddf_rg_error": null,
"guinier_rg": 7.623,
"guinier_rg_error": 1.75,
"pddf_dmax": null,
"pddf_dmax_error": null,
"porod_volume": null,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 1,
"guinier_point_last": 8,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDXR5_datloglog_img.png",
"symmetry": null,
"last_modified": "2025-09-03T03:51:04.623289+02:00",
"bragg_peak": []
}
查看完整 manifest.json 原文
{
"code": "SASDXR5",
"status": "success",
"started_at": "2026-08-11T14:54:26.802685+00:00",
"finished_at": "2026-08-11T14:54:32.101316+00:00",
"source_last_modified": "2025-09-03T03:51:04.623289+02:00",
"files": [
{
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDXR5/",
"path": "/data/saxsdb/sasbdb/entries/r5/sasdxr5/source/summary.json",
"size": 5984,
"sha256": "2b7225bab7ba075759a770153a8a5076bc7feabbbbe52c81b060f288b8651c25"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDXR5.dat",
"path": "/data/saxsdb/sasbdb/entries/r5/sasdxr5/source/SASDXR5.dat",
"size": 25793,
"sha256": "da43aa7caf7a8aa48e680a23cce04daf665d208fe6f474b81d722cc33be4c712",
"role": "curve"
},
{
"role": "pddf",
"status": "not_listed",
"path": "/data/saxsdb/sasbdb/entries/r5/sasdxr5/source/SASDXR5.out"
},
{
"status": "not_available",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDXR5.sascif",
"path": "/data/saxsdb/sasbdb/entries/r5/sasdxr5/source/SASDXR5.sascif",
"role": "sascif"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDXR5.zip",
"path": "/data/saxsdb/sasbdb/entries/r5/sasdxr5/source/SASDXR5.zip",
"size": 8010,
"sha256": "c526481c4764f0046a98a956b6db8cfce26915a25aff9503696dbca410e9f7f6",
"role": "full_entry_zip",
"zip_member_count": 1,
"zip_validation": "central_directory_readable"
}
]
}