查看完整 summary.json 原文
{
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"title": "Single-engineered-residue solvation perturbations regulate global protein architecture and function.",
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"title": "Single-engineered-residue solvation perturbations regulate global protein architecture and function.",
"author_list": "Liu Y, Zhai J, Cao S, Guo H, Zhang H, Song B, Guo J, Men D, He X, Li D",
"journal": "Nat Commun",
"doi": "10.1038/s41467-026-70155-2",
"pmid": "41807374",
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"last_modified": "2026-03-16T10:30:41.880631+01:00",
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}
查看完整 manifest.json 原文
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