查看完整 summary.json 原文
{
"code": "SASDYR9",
"status": "Published",
"type_of_curve": "SEC-SAS",
"angular_unit": "1/nm",
"project": {
"title": "ATPLyzer—An Advanced Ratiometric Multi‐Color Biosensor for Long‐Term Monitoring of ATP Dynamics",
"publication": {
"title": "ATPLyzer—An Advanced Ratiometric Multi‐Color Biosensor for Long‐Term Monitoring of ATP Dynamics",
"author_list": "Papadopoulos A, Kaiser C, Schlumpberger P, Eßer J, Reiners J, Gertzen C, Grossmann G, Smits S",
"journal": "Advanced Sensor Research",
"doi": "10.1002/adsr.70171",
"pmid": null,
"published_date": "2026 Jun 27"
},
"status": "released",
"submitted_date": "2026-03-09",
"released_date": "2026-06-09"
},
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"experiment": {
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"type": null,
"name": "Pilatus3 2M",
"resolution": 0.172
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"name": "ESRF",
"city": "Grenoble",
"country": "France",
"beamline_name": "BM29",
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"type_of_source": "X-ray synchrotron",
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{
"long_name": "Ratiometric matryoshka multi-colour biosensor for ATP",
"short_name": "ATPLyzer GO 1.7m ATP",
"sequence": "MRGSHHHHHHGMASMTGGQQMGRDLYDDDDKDPMKTVKVNITTPDGPVYDADIEMVSVRAESGDLGILPGHIPTKAPLKIGAVRLKKDGQTEMVAVSGGTVEVRPDHVTINAQAAETAEGIDKERAEAARQRAQERLNSQTRYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAGITHGMDELYGGTMVSKGEENNMAIIKEFMRFKVRMEGSVNGHEFEIEGEGEGRPYEGFQTVKLKVTKGGPLPFAWDILSPQFTYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGMEASSERMYPEDGALKGEDKLRLKLKDGGHYTSEVKTTYKAKKPVQLPGAYIVDIKLDITSHNEDYTIVEQYERAEGRHSTGGMDELYKGGSASQGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNLGDIDFKRAELALKRAMNRLSVAEMK",
"organism": "synthetic construct",
"uniprot_code": null,
"uniprot_range_first": null,
"uniprot_range_last": null,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "",
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"total_mw": 72.205,
"number_molecules": 1,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": "The sensor contains different domains: • ε subunit of the bacterial FoF1 ATPase from Bacillus spec. • superfolder circularly permutated GFP (cpsfGFP (reporter fluorophore) from Aequorea victoria) • LSSmApple (reference fluorophore) from Discosoma sp. and is constructed as: 1–39 N-Terminal 10xHis, T7tag, enterokinase site/XpressTag, 40–147 εFoF1-N-terminus of B. subtilis, 148–151 PASH Linker, 152–240 cpsfGFP-C-terminus, 241–243 GGT Linker, 244–478 LSSmApple, 479–481 GGS Linker, 482–625 cpsfGFP-N-terminus, 626–629 FNNP Linker, 630–708 εFoF1-N-terminus of B. PS3-C-terminus."
}
],
"buffer": {
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"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.0,
"deuteration": null
},
"purity_method": null,
"name": "ATPLyzer GO 1.7 m ATP",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": "Düsseldorf, Germany",
"full_name": "Heinrich Heine University Düsseldorf",
"webpage": "https://www.uni-duesseldorf.de"
}
],
"contributor_name": "Jens",
"contributor_surname": "Reiners",
"orcid": ""
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2023-11-30",
"storage_temperature": 10.0,
"cell_temperature": 10.0,
"exposure_time": 3.0,
"number_of_frames": 800,
"wavelength": 0.099,
"sample_detector_distance": 2.812,
"concentration_min": null,
"concentration_max": 4.9,
"sample_volume": 100.0,
"flow_rate": 0.6,
"s_min": 0.085,
"s_max": 4.012,
"total_exposure_time": null,
"seccolumn": 1
},
"fits": [
{
"models": [
{
"model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDYR9_fit1_model1_img.png",
"software": "EOM/RANCH",
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"model_title": null,
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"software_version": null,
"model_data": "https://www.sasbdb.org/media/pdb_file/SASDYR9_fit1_model1.pdb",
"model_mw": 72.37,
"bead_radius": 1.9,
"log": "https://www.sasbdb.org/media/log_files/test00.log",
"symmetry": "P1",
"comment": null,
"user": 402
}
],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDYR9_fit1_fixed_fit_img.png",
"software": "CRYSOL",
"chi_square_value": 0.995,
"p_value": 0.7803,
"fit_residual_plot": "SASDYR9_fit1_fitresiduals_img.png",
"fit_data": "https://www.sasbdb.org/media/fitting_files/SASDYR9_fit1.fit",
"fit_log": "https://www.sasbdb.org/media/fitting_files/log_files/test00.log",
"software_version": "C R Y S O L Version 2.8.3",
"description": ""
}
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"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": "5.0",
"i0_calibration_standard": null,
"description": "Please read the molecule description by clicking the molecule link. Collected raw SAXS data from the ESRF (proposal ID MX-2485) can be found under: https://doi.org/10.15151/ESRF-DC-2387389777",
"experiment_description": null,
"tags": [],
"intensity_unit": "1/cm",
"experimental_mw": 72.22,
"experimental_mw_error": null,
"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": 66.0,
"porod_mw_error": null,
"pddf_i0": 30.39,
"pddf_i0_error": null,
"guinier_i0": 30.3711,
"guinier_i0_error": null,
"pddf_rg": 3.747,
"pddf_rg_error": null,
"guinier_rg": 3.67,
"guinier_rg_error": 0.02,
"pddf_dmax": 12.02,
"pddf_dmax_error": null,
"porod_volume": 106.16,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 1,
"guinier_point_last": 53,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDYR9_datloglog_img.png",
"symmetry": null,
"last_modified": "2026-06-30T10:44:46.834115+02:00",
"bragg_peak": []
}查看完整 manifest.json 原文
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"started_at": "2026-08-11T16:21:02.014159+00:00",
"finished_at": "2026-08-11T16:21:10.396969+00:00",
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