下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;Not declared的单位不会由 SAXSdb 猜测。
打开 SASBDB 原始条目
缓冲液与样品属性
采集条件与仪器
SASBDB 原始图
实验 I(q)
实验 I(q) log-log
Guinier 图
Kratky 图
P(r) 图
可Download文件
curve:来源记录
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"url": "https://www.sasbdb.org/media/intensities_files/SASDZT5.dat"
}full_entry_zip:来源记录与 ZIP 内部目录(4 项)
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"sha256": "52d3bf3153509ff286cfba78c7d9cbd2f1082831e25041bc80541a07a4bd04d3",
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"url": "https://www.sasbdb.org/media/zip_directories/SASDZT5.zip",
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"name": "SASDZT5/pddf/SASDZT5.out",
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"name": "SASDZT5/SASDZT5_fit1.dat",
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"name": "SASDZT5/SASDZT5_fit1_model1.pdb",
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}pddf:来源记录
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"role": "pddf",
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"size": 82350,
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDZT5.out"
}sascif:来源记录
{
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"role": "sascif",
"status": "not_available",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDZT5.sascif"
}summary:来源记录
{
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"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDZT5/"
}
全部来源字段(无筛选)
这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。
summary.json:151 个字段值
manifest.json:34 个字段值
查看完整 summary.json 原文
{
"code": "SASDZT5",
"status": "Published",
"type_of_curve": "SEC-SAS",
"angular_unit": "1/A",
"project": {
"title": "Freezing the P-Rex2 DH/PH tandem",
"publication": null,
"status": "released",
"submitted_date": "2026-04-03",
"released_date": "2026-07-23"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDZT5.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDZT5.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDZT5_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDZT5_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDZT5_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDZT5_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDZT5.sascif",
"experiment": {
"instrument": {
"detector": {
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"name": "Pilatus3 X 2M",
"resolution": 172.0
},
"name": "Advanced Light Source (ALS)",
"city": "Berkeley, CA",
"country": "USA",
"beamline_name": "12.3.1 (SIBYLS)",
"beam_geometry": "",
"type_of_source": "X-ray synchrotron",
"point_source": null,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 DH/PH tandem",
"short_name": "P-Rex2 DH/PH tandem",
"sequence": "GAMDPMSEDSRGDSRAESAKDLEKQLRLRVCVLSELQKTERDYVGTLEFLVSAFLHRMNQCAASKVDKNVTEETVKMLFSNIEDILAVHKEFLKVVEECLHPEPNAQQEVGTCFLHFKDKFRIYDEYCSNHEKAQKLLLELNKIRTIRTFLLNCMLLGGRKNTDVPLEGYLVTPIQRICKYPLILKELLKRTPRKHSDYAAVMEALQAMKAVCSNINEAKRQMEKLEVLEEWQSHIEGWEGSNITDTCTEMLMCGVLLKISSGNIQERVFFLFDNLLVYCKRKHRRLKNSKASTDGHRYLFRGRINTEVMEVENVDDGTADFHSSGHIVVNGWKIHNTAKNKWFVCMAKTPEEKHEWFEAILKERERRKGLKLGMEQDTWVM",
"organism": "Homo sapiens",
"uniprot_code": "Q70Z35",
"uniprot_range_first": 1,
"uniprot_range_last": 377,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": "MSEDSRGDSRAESAKDLEKQLRLRVCVLSELQKTERDYVGTLEFLVSAFLHRMNQCAASK\nVDKNVTEETVKMLFSNIEDILAVHKEFLKVVEECLHPEPNAQQEVGTCFLHFKDKFRIYD\nEYCSNHEKAQKLLLELNKIRTIRTFLLNCMLLGGRKNTDVPLEGYLVTPIQRICKYPLIL\nKELLKRTPRKHSDYAAVMEALQAMKAVCSNINEAKRQMEKLEVLEEWQSHIEGWEGSNIT\nDTCTEMLMCGVLLKISSGNIQERVFFLFDNLLVYCKRKHRRLKNSKASTDGHRYLFRGRI\nNTEVMEVENVDDGTADFHSSGHIVVNGWKIHNTAKNKWFVCMAKTPEEKHEWFEAILKER\nERRKGLKLGMEQDTWVMISEQGEKLYKMMCRQGNLIKDRKRKLTTFPKCFLGSEFVSWLL\nEIGEIHRPEEGVHLGQALLENGIIHHVTDKHQFKPEQMLYRFRYDDGTFYPRNEMQDVIS\nKGVRLYCRLHSLFTPVIRDKDYHLRTYKSVVMANKLIDWLIAQGDCRTREEAMIFGVGLC\nDNGFMHHVLEKSEFKDEPLLFRFFSDEEMEGSNMKHRLMKHDLKVVENVIAKSLLIKSNE\nGSYGFGLEDKNKVPIIKLVEKGSNAEMAGMEVGKKIFAINGDLVFMRPFNEVDCFLKSCL\nNSRKPLRVLVSTKPRETVKIPDSADGLGFQIRGFGPSVVHAVGRGTVAAAAGLHPGQCII\nKVNGINVSKETHASVIAHVTACRKYRRPTKQDSIQWVYNSIESAQEDLQKSHSKPPGDEA\nGDAFDCKVEEVIDKFNTMAIIDGKKEHVSLTVDNVHLEYGVVYEYDSTAGIKCNVVEKMI\nEPKGFFSLTAKILEALAKSDEHFVQNCTSLNSLNEVIPTDLQSKFSALCSERIEHLCQRI\nSSYKKFSRVLKNRAWPTFKQAKSKISPLHSSDFCPTNCHVNVMEVSYPKTSTSLGSAFGV\nQLDSRKHNSHDKENKSSEQGKLSPMVYIQHTITTMAAPSGLSLGQQDGHGLRYLLKEEDL\nETQDIYQKLLGKLQTALKEVEMCVCQIDDLLSSITYSPKLERKTSEGIIPTDSDNEKGER\nNSKRVCFNVAGDEQEDSGHDTISNRDSYSDCNSNRNSIASFTSICSSQCSSYFHSDEMDS\nGDELPLSVRISHDKQDKIHSCLEHLFSQVDSITNLLKGQAVVRAFDQTKYLTPGRGLQEF\nQQEMEPKLSCPKRLRLHIKQDPWNLPSSVRTLAQNIRKFVEEVKCRLLLALLEYSDSETQ\nLRRDMVFCQTLVATVCAFSEQLMAALNQMFDNSKENEMETWEASRRWLDQIANAGVLFHF\nQSLLSPNLTDEQAMLEDTLVALFDLEKVSFYFKPSEEEPLVANVPLTYQAEGSRQALKVY\nFYIDSYHFEQLPQRLKNGGGFKIHPVLFAQALESMEGYYYRDNVSVEEFQAQINAASLEK\nVKQYNQKLRAFYLDKSNSPPNSTSKAAYVDKLMRPLNALDELYRLVASFIRSKRTAACAN\nTACSASGVGLLSVSSELCNRLGACHIIMCSSGVHRCTLSVTLEQAIILARSHGLPPRYIM\nQATDVMRKQGARVQNTAKNLGVRDRTPQSAPRLYKLCEPPPPAGEE",
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"number_molecules": 1,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": "Isolated P-Rex2 DH/PH tandem with residual linker (GAMDP) from N-terminal TEV cleavage"
}
],
"buffer": {
"name": "20 mM HEPES, 200 mM NaCl, 2 mM DTT, 1% glycerol",
"concentration_unit": null,
"comment": null,
"additive": null,
"concentration": null,
"pka": null,
"ph": 7.0,
"deuteration": null
},
"purity_method": null,
"name": "Frozen human P-Rex2 DH/PH (Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein) without cryoprotectant",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": null,
"address": null,
"full_name": "University of California, Davis",
"webpage": null
}
],
"contributor_name": "Lauren",
"contributor_surname": "Anderson",
"orcid": "http://lauanderson@ucdavis.edu"
}
],
"concentration_method": null,
"concentration_unit": null,
"date": "2026-02-17",
"storage_temperature": null,
"cell_temperature": null,
"exposure_time": 2.0,
"number_of_frames": 750,
"wavelength": 0.0127,
"sample_detector_distance": 2.1,
"concentration_min": null,
"concentration_max": 2.0,
"sample_volume": null,
"flow_rate": 0.65,
"s_min": 0.134,
"s_max": 4.712,
"total_exposure_time": null,
"seccolumn": 17
},
"fits": [
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"software": "BILBOMD",
"pdb_link": [],
"model_title": null,
"type_of_model": "atomic",
"software_version": null,
"model_data": "https://www.sasbdb.org/media/pdb_file/SASDZT5_fit1_model1.pdb",
"model_mw": 43.75,
"bead_radius": null,
"log": null,
"symmetry": null,
"comment": null,
"user": 1310
}
],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDZT5_fit1_fitfoxs_img.png",
"software": "MultiFoXS",
"chi_square_value": 0.733053,
"p_value": 0.5882,
"fit_residual_plot": "SASDZT5_fit1_fitfoxsresiduals_img.png",
"fit_data": "https://www.sasbdb.org/media/fitting_files/SASDZT5_fit1.dat",
"fit_log": "https://www.sasbdb.org/media/fitting_files/log_files/feedback_TdHLXVy.log",
"software_version": null,
"description": ""
}
],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": null,
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [],
"intensity_unit": "arbitrary",
"experimental_mw": 42.5,
"experimental_mw_error": null,
"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": 45.6,
"porod_mw_error": null,
"pddf_i0": 11.17,
"pddf_i0_error": 0.06,
"guinier_i0": 11.1429,
"guinier_i0_error": null,
"pddf_rg": 2.61,
"pddf_rg_error": 0.018,
"guinier_rg": 2.583,
"guinier_rg_error": 0.247,
"pddf_dmax": 8.5,
"pddf_dmax_error": null,
"porod_volume": 55.0,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 1,
"guinier_point_last": 75,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDZT5_datloglog_img.png",
"symmetry": null,
"last_modified": "2026-07-23T20:40:36.056258+02:00",
"bragg_peak": []
}
查看完整 manifest.json 原文
{
"code": "SASDZT5",
"status": "success",
"started_at": "2026-08-11T14:56:15.872686+00:00",
"finished_at": "2026-08-11T14:56:24.174827+00:00",
"source_last_modified": "2026-07-23T20:40:36.056258+02:00",
"files": [
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}