SASDZZ5

C-type lectin mosGCTL-3 from Aedes aegypti, ~0.3 mg/ml

Data type: SASBDB experimental data Status: Published Curve type: Single concentration Last updated: 2026-05-05T17:30:58.607607+02:00
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1. Samples, Components and Experimental Conditions Sample & Experiment

Sample 1 · C-type lectin mosGCTL-3 from Aedes aegypti, ~0.3 mg/ml

Concentration— – 0.3 Buffer / pH20 mM Tris, 250 mM NaCl, 2.5 mM CaCl2 / 7.5
Experimental temperature15.0 Facility / beamlineDiamond Light Source / B21
Wavelength0.1 nmExposure— s × 20

Molecular Components

ComponentType / organismUniProt and ConstructOligomeric StateMolecular weight
mosGCTL-3
View sequence
QPICSDKPTSFFIPNKRTNWIGAVEYCNRMDMRLAVISSEAKNVAVLETIQSARANGWKLSNVWIGANDISMEGKFIWHATGQPVNYTNWALNMPDDLQDEDCVEIAYQEYTQWTWKWNDNTCDFMYNFVCESDFLSRCGNNDSIQEFKHHHHHH
proteinAedes aegypti——–—dimerMolecule count 218.125 kDa

Experimental Curves

CurvePoints / columnsq rangeUncertainty qualityNegative-intensity pointsSource file
12526[3]0.007861598–0.34 1/AHas uncertainty columnMissing 0549sasbdb/entries/z5/sasdzz5/source/SASDZZ5.dat
▼

2. Measurements Reported by SASBDB Reported Results

MetricMethodValueUncertaintyUnit
i0Guinier0.00918448—1/cm
mwExperimental37.9—kDa
rgGuinier2.3780.201Å

These values are reported by SASBDB; SAXSdb did not recalculate them from the experimental curve.

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3. Source Fits and Models Source Fits & Models

This entry has no source fit record.

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4. Source File Index Source Files

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5. Experiment Description and Publication Experiment & Publication

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6. Complete Source Record Complete Source Record

The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.

Open the original SASBDB entry

Buffer and Sample Properties

Buffer name20 mM Tris, 250 mM NaCl, 2.5 mM CaCl2Buffer concentration—
pH7.5Additives—
Buffer description—
Purity measurement method—Extinction coefficient—
Absorbance—Scattering contrast—
Specific volume / dry volume— / —Mixture / deuteration— / —

Acquisition Conditions and Instrument

Measurement date2020-12-17Storage / measurement temperature— / 15.0
Exposure time—Frames20
Wavelength0.1Sample-to-detector distance3.7
SourceX-ray synchrotronDetectorEiger 4M
Facility / beamlineDiamond Light Source / B21 · Didcot, UK
q range0.079 – 3.4Sample volume / flow rate— / —

Original SASBDB Plots

Experimental I(q)
Experimental I(q)
Experimental I(q), log-log
Experimental I(q), log-log
Guinier plot
Guinier plot
Kratky plot
Kratky plot

Downloadable Files

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pddfsasbdb/entries/z5/sasdzz5/source/SASDZZ5.outnot_listed——DownloadView source file
sascifsasbdb/entries/z5/sasdzz5/source/SASDZZ5.sascifnot_available——DownloadView source fileSource site
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full_entry_zip:source record and ZIP contents (1 items)
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sascif:source record
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summary:source record
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All source fields (unfiltered)

Every source field is expanded here, including empty values, list members and fields already shown above.

summary.json:129 field values
Field pathRaw value
codeSASDZZ5
statusPublished
type_of_curveSingle concentration
angular_unit1/A
project.titleConserved dimerization architecture in C-type lectins from virus-vector mosquitoes
project.publicationnull
project.statusreleased
project.submitted_date2026-05-05
project.released_date2026-05-05
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experiment.instrument.detector.resolution75.0
experiment.instrument.nameDiamond Light Source
experiment.instrument.cityDidcot
experiment.instrument.countryUK
experiment.instrument.beamline_nameB21
experiment.instrument.beam_geometrynull
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
experiment.instrument.line_collimation_slitlengthnull
experiment.instrument.line_collimation_integrationwidthnull
experiment.instrument.xray_energynull
experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_namemosGCTL-3
experiment.sample.molecule[0].short_namenull
experiment.sample.molecule[0].sequenceQPICSDKPTSFFIPNKRTNWIGAVEYCNRMDMRLAVISSEAKNVAVLETIQSARANGWKLSNVWIGANDISMEGKFIWHATGQPVNYTNWALNMPDDLQDEDCVEIAYQEYTQWTWKWNDNTCDFMYNFVCESDFLSRCGNNDSIQEFKHHHHHH
experiment.sample.molecule[0].organismAedes aegypti
experiment.sample.molecule[0].uniprot_codenull
experiment.sample.molecule[0].uniprot_range_firstnull
experiment.sample.molecule[0].uniprot_range_lastnull
experiment.sample.molecule[0].oligomerizationdimer
experiment.sample.molecule[0].molecular_typeprotein
experiment.sample.molecule[0].uniprot_sequence
experiment.sample.molecule[0].mw18.125
experiment.sample.molecule[0].total_mw36.25
experiment.sample.molecule[0].number_molecules2
experiment.sample.molecule[0].complex_stateFalse
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionSoluble C-type lectin from Aedes aegypti. Full amino acid sequence was determined by 5′-rapid amplification of cDNA ends, described in doi: 10.1371/journal.ppat.1003931. Protein was expressed in Sf9 cells. His-tag is present.
experiment.sample.buffer.name20 mM Tris, 250 mM NaCl, 2.5 mM CaCl2
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additivenull
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph7.5
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameC-type lectin mosGCTL-3 from Aedes aegypti, ~0.3 mg/ml
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_namenull
experiment.contributor[0].affiliation[0].addressnull
experiment.contributor[0].affiliation[0].full_nameUmeå University
experiment.contributor[0].affiliation[0].webpagenull
experiment.contributor[0].contributor_nameMax
experiment.contributor[0].contributor_surnameRenner
experiment.contributor[0].orcid
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2020-12-17
experiment.storage_temperaturenull
experiment.cell_temperature15.0
experiment.exposure_timenull
experiment.number_of_frames20
experiment.wavelength0.1
experiment.sample_detector_distance3.7
experiment.concentration_minnull
experiment.concentration_max0.3
experiment.sample_volumenull
experiment.flow_ratenull
experiment.s_min0.079
experiment.s_max3.4
experiment.total_exposure_timenull
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fits[]
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pddf_softwarenull
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i0_calibration_standardnull
descriptionnull
experiment_descriptionnull
tags[]
intensity_unit1/cm
experimental_mw37.9
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mwnull
porod_mw_errornull
pddf_i0null
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guinier_i00.00918448
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pddf_rgnull
pddf_rg_errornull
guinier_rg2.378
guinier_rg_error0.201
pddf_dmaxnull
pddf_dmax_errornull
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porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first26
guinier_point_last353
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDZZ5_datloglog_img.png
symmetrynull
last_modified2026-05-05T17:30:58.607607+02:00
bragg_peak[]
manifest.json:31 field values
Field pathRaw value
codeSASDZZ5
statussuccess
started_at2026-08-11T16:43:24.017505+00:00
finished_at2026-08-11T16:43:30.344157+00:00
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View the complete summary.json source
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View the complete manifest.json source
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