10yy
Crystal Structure of the Chaperonin GroEL apical domain from Bordetella pertussis
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 10yy |
| deposition_date | 2026-02-12 |
| last_revision | 2026-02-25 |
| title | Crystal Structure of the Chaperonin GroEL apical domain from Bordetella pertussis |
| keywords | SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, Chaperonin, GroEL, CHAPERONE; CHAPERONE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 17.63 Å |
| rg_electron | 16.34 Å |
| i0 | 7343290.00 |
| molecular_weight | 19648.0 kDa |
| excluded_volume | 24634 ų |
| envelope_volume | 28461 ų |
| shell_volume | 14958 ų |
| envelope_diameter | 59.4 Å |
| shell_rg | 22.06 Å |
| envelope_rg | 16.70 Å |
| shape_rg | 16.34 Å |
| total_rg | 17.36 Å |
| total_atoms | 1380 |
| n_residues | 184 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 59.8 Å |
| rg_real | 17.57 Å |
| rg_real_error | 0.45 Å |
| i0_real | 7.3430e+06 |
| i0_real_error | 9.6230e+04 |
| rg_reciprocal | 17.58 Å |
| i0_reciprocal | 7343000.0000 |
| total_estimate | 0.7786 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 23.1 Å |
| skewness | 0.298 |
| kurtosis | -0.154 |
| angular_range | — – 0.4500 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1523000.0000 |
| n_real_points | 76 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.711; Stabil: 0.997; Sysdev: 1.000; Positv: 1.000; Valcen: 0.992; Smooth: 0.000 |