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1a2v

COPPER AMINE OXIDASE FROM HANSENULA POLYMORPHA

Method: X-RAY DIFFRACTION D_max: 139.7 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1a2v
deposition_date	1998-01-12
title	COPPER AMINE OXIDASE FROM HANSENULA POLYMORPHA
keywords	AMINE OXIDASE, QUINOPROTEIN, TOPAQUINONE ENZYME, TPQ; AMINE OXIDASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	52.19 Å
rg_electron	51.71 Å
i0	2766160000.00
molecular_weight	441910.0 kDa
excluded_volume	551630 Å³
envelope_volume	723020 Å³
shell_volume	108250 Å³
envelope_diameter	154.5 Å
shell_rg	63.20 Å
envelope_rg	50.21 Å
shape_rg	51.68 Å
total_rg	52.11 Å
total_atoms	31170
n_residues	3924
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	139.7 Å
rg_real	51.93 Å
rg_real_error	0.64 Å
i0_real	2.7660e+09
i0_real_error	4.3830e+07
rg_reciprocal	52.38 Å
i0_reciprocal	2768000000.0000
total_estimate	0.8418
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	79.1 Å
skewness	-0.025
kurtosis	-0.812
angular_range	— – 0.1500 Å⁻¹
current_alpha	0.0000
highest_alpha	970100000.0000
n_real_points	31
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 1.000; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.939; Smooth: 0.000

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

Entity 1 polymer

description	METHYLAMINE OXIDASE
formula_weight	73690.0 kDa
ec_number	1.4.3.6
src_method	man
entity_count	6

Polymer

type	polypeptide(L)
strand_id	A,B,C,D,E,F
atom_count	33726

PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV

Source

organism	Pichia angusta
ncbi_taxonomy_id	4905
host_organism	Saccharomyces cerevisiae

Entity 2 non-polymer

description	COPPER (II) ION
formula_weight	63.5 kDa
src_method	syn
entity_count	6

Entity 3 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	2556

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6. Citations (1)

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length_a	138.770 Å
length_b	148.220 Å
length_c	234.010 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	24

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

resolution	2.400 Å
resolution_low	100.000 Å
r_factor	0.1840
r_work	0.1840
r_free	0.2240

fit	/app/data/saxs_computation/a2/1a2v/1a2v.fit
pddf	/app/data/pr_computation/a2/1a2v/1a2v.pr.out
profile	/app/data/saxs_computation/a2/1a2v/1a2v.dat

COPPER AMINE OXIDASE FROM HANSENULA POLYMORPHA

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction