1a9x

CARBAMOYL PHOSPHATE SYNTHETASE: CAUGHT IN THE ACT OF GLUTAMINE HYDROLYSIS

Method: X-RAY DIFFRACTION Dmax: 258.1 Å Quality: GOOD

1. 蛋白身份与相关结构 Protein Identity & Related Structures

CARBAMOYL PHOSPHATE SYNTHETASE (LARGE CHAIN)

Escherichia coli

UniProt P00968

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白异源复合物 异源复合物 蛋白 × 8 PDB 声明:octameric(8) 与蛋白拷贝数一致 链 A; UniProt 1–1072 链 C; UniProt 1–1072 链 E; UniProt 1–1072 链 G; UniProt 1–1072 未记录 CARBAMOYL PHOSPHATE SYNTHETASE (SMALL CHAIN) × 4 (P00907) PO4 PHOSPHATE ION × 15 MN MANGANESE (II) ION × 12 K POTASSIUM ION × 32 CL CHLORIDE ION × 28 ADP ADENOSINE-5'-DIPHOSPHATE × 8 ORN L-ornithine × 4 NET TETRAETHYLAMMONIUM ION × 4 X-RAY DIFFRACTION X-ray结晶条件:pH 7.4;0.65M NET4CL 8% PEG 8000 100MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 THEN SOAKED INTO: 1.4M NET4CL 8% PEG 8000 250MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 7.5% ETHYLENE GLYCOL 分辨率 1.80 Å
2 蛋白异源复合物 异源复合物 蛋白 × 2 PDB 声明:dimeric(2) 与蛋白拷贝数一致 链 A; UniProt 1–1072 未记录 CARBAMOYL PHOSPHATE SYNTHETASE (SMALL CHAIN) × 1 (P00907) PO4 PHOSPHATE ION × 4 MN MANGANESE (II) ION × 3 K POTASSIUM ION × 8 CL CHLORIDE ION × 7 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ORN L-ornithine × 1 NET TETRAETHYLAMMONIUM ION × 1 X-RAY DIFFRACTION X-ray结晶条件:pH 7.4;0.65M NET4CL 8% PEG 8000 100MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 THEN SOAKED INTO: 1.4M NET4CL 8% PEG 8000 250MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 7.5% ETHYLENE GLYCOL 分辨率 1.80 Å
3 蛋白异源复合物 异源复合物 蛋白 × 2 PDB 声明:dimeric(2) 与蛋白拷贝数一致 链 G; UniProt 1–1072 未记录 CARBAMOYL PHOSPHATE SYNTHETASE (SMALL CHAIN) × 1 (P00907) PO4 PHOSPHATE ION × 4 MN MANGANESE (II) ION × 3 K POTASSIUM ION × 8 CL CHLORIDE ION × 7 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ORN L-ornithine × 1 NET TETRAETHYLAMMONIUM ION × 1 X-RAY DIFFRACTION X-ray结晶条件:pH 7.4;0.65M NET4CL 8% PEG 8000 100MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 THEN SOAKED INTO: 1.4M NET4CL 8% PEG 8000 250MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 7.5% ETHYLENE GLYCOL 分辨率 1.80 Å
4 蛋白异源复合物 异源复合物 蛋白 × 2 PDB 声明:dimeric(2) 与蛋白拷贝数一致 链 C; UniProt 1–1072 未记录 CARBAMOYL PHOSPHATE SYNTHETASE (SMALL CHAIN) × 1 (P00907) PO4 PHOSPHATE ION × 4 MN MANGANESE (II) ION × 3 K POTASSIUM ION × 8 CL CHLORIDE ION × 7 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ORN L-ornithine × 1 NET TETRAETHYLAMMONIUM ION × 1 X-RAY DIFFRACTION X-ray结晶条件:pH 7.4;0.65M NET4CL 8% PEG 8000 100MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 THEN SOAKED INTO: 1.4M NET4CL 8% PEG 8000 250MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 7.5% ETHYLENE GLYCOL 分辨率 1.80 Å
5 蛋白异源复合物 异源复合物 蛋白 × 2 PDB 声明:dimeric(2) 与蛋白拷贝数一致 链 E; UniProt 1–1072 未记录 CARBAMOYL PHOSPHATE SYNTHETASE (SMALL CHAIN) × 1 (P00907) PO4 PHOSPHATE ION × 3 MN MANGANESE (II) ION × 3 K POTASSIUM ION × 8 CL CHLORIDE ION × 7 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ORN L-ornithine × 1 NET TETRAETHYLAMMONIUM ION × 1 X-RAY DIFFRACTION X-ray结晶条件:pH 7.4;0.65M NET4CL 8% PEG 8000 100MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 THEN SOAKED INTO: 1.4M NET4CL 8% PEG 8000 250MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 7.5% ETHYLENE GLYCOL 分辨率 1.80 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 9 个其他 PDB 条目、33 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 CARB_ECOLI
Isoform
PDB实体 1
链与序列区间 作者链 A; PDB构建体 2–1073; UniProt 1–1072 作者链 C; PDB构建体 2–1073; UniProt 1–1072 作者链 E; PDB构建体 2–1073; UniProt 1–1072 作者链 G; PDB构建体 2–1073; UniProt 1–1072

CARBAMOYL PHOSPHATE SYNTHETASE (SMALL CHAIN)

Escherichia coli

UniProt P00907

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白异源复合物 异源复合物 蛋白 × 8 PDB 声明:octameric(8) 与蛋白拷贝数一致 链 B; UniProt 2–380 链 D; UniProt 2–380 链 F; UniProt 2–380 链 H; UniProt 2–380 突变:H353N 非标准单体:是(mmCIF未提供具体位点) CARBAMOYL PHOSPHATE SYNTHETASE (LARGE CHAIN) × 4 (P00968) PO4 PHOSPHATE ION × 15 MN MANGANESE (II) ION × 12 K POTASSIUM ION × 32 CL CHLORIDE ION × 28 ADP ADENOSINE-5'-DIPHOSPHATE × 8 ORN L-ornithine × 4 NET TETRAETHYLAMMONIUM ION × 4 X-RAY DIFFRACTION X-ray结晶条件:pH 7.4;0.65M NET4CL 8% PEG 8000 100MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 THEN SOAKED INTO: 1.4M NET4CL 8% PEG 8000 250MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 7.5% ETHYLENE GLYCOL 分辨率 1.80 Å
2 蛋白异源复合物 异源复合物 蛋白 × 2 PDB 声明:dimeric(2) 与蛋白拷贝数一致 链 B; UniProt 2–380 突变:H353N 非标准单体:是(mmCIF未提供具体位点) CARBAMOYL PHOSPHATE SYNTHETASE (LARGE CHAIN) × 1 (P00968) PO4 PHOSPHATE ION × 4 MN MANGANESE (II) ION × 3 K POTASSIUM ION × 8 CL CHLORIDE ION × 7 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ORN L-ornithine × 1 NET TETRAETHYLAMMONIUM ION × 1 X-RAY DIFFRACTION X-ray结晶条件:pH 7.4;0.65M NET4CL 8% PEG 8000 100MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 THEN SOAKED INTO: 1.4M NET4CL 8% PEG 8000 250MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 7.5% ETHYLENE GLYCOL 分辨率 1.80 Å
3 蛋白异源复合物 异源复合物 蛋白 × 2 PDB 声明:dimeric(2) 与蛋白拷贝数一致 链 H; UniProt 2–380 突变:H353N 非标准单体:是(mmCIF未提供具体位点) CARBAMOYL PHOSPHATE SYNTHETASE (LARGE CHAIN) × 1 (P00968) PO4 PHOSPHATE ION × 4 MN MANGANESE (II) ION × 3 K POTASSIUM ION × 8 CL CHLORIDE ION × 7 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ORN L-ornithine × 1 NET TETRAETHYLAMMONIUM ION × 1 X-RAY DIFFRACTION X-ray结晶条件:pH 7.4;0.65M NET4CL 8% PEG 8000 100MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 THEN SOAKED INTO: 1.4M NET4CL 8% PEG 8000 250MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 7.5% ETHYLENE GLYCOL 分辨率 1.80 Å
4 蛋白异源复合物 异源复合物 蛋白 × 2 PDB 声明:dimeric(2) 与蛋白拷贝数一致 链 D; UniProt 2–380 突变:H353N 非标准单体:是(mmCIF未提供具体位点) CARBAMOYL PHOSPHATE SYNTHETASE (LARGE CHAIN) × 1 (P00968) PO4 PHOSPHATE ION × 4 MN MANGANESE (II) ION × 3 K POTASSIUM ION × 8 CL CHLORIDE ION × 7 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ORN L-ornithine × 1 NET TETRAETHYLAMMONIUM ION × 1 X-RAY DIFFRACTION X-ray结晶条件:pH 7.4;0.65M NET4CL 8% PEG 8000 100MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 THEN SOAKED INTO: 1.4M NET4CL 8% PEG 8000 250MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 7.5% ETHYLENE GLYCOL 分辨率 1.80 Å
5 蛋白异源复合物 异源复合物 蛋白 × 2 PDB 声明:dimeric(2) 与蛋白拷贝数一致 链 F; UniProt 2–380 突变:H353N 非标准单体:是(mmCIF未提供具体位点) CARBAMOYL PHOSPHATE SYNTHETASE (LARGE CHAIN) × 1 (P00968) PO4 PHOSPHATE ION × 3 MN MANGANESE (II) ION × 3 K POTASSIUM ION × 8 CL CHLORIDE ION × 7 ADP ADENOSINE-5'-DIPHOSPHATE × 2 ORN L-ornithine × 1 NET TETRAETHYLAMMONIUM ION × 1 X-RAY DIFFRACTION X-ray结晶条件:pH 7.4;0.65M NET4CL 8% PEG 8000 100MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 THEN SOAKED INTO: 1.4M NET4CL 8% PEG 8000 250MM KCL 2.5MM MNCL2 2.5MM ADP 2.5MM ORNITHINE 5MM GLUTAMINE 25MM HEPES PH 7.4 7.5% ETHYLENE GLYCOL 分辨率 1.80 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。

共 7 个其他 PDB 条目、23 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 CARA_ECOLI
Isoform
PDB实体 2
链与序列区间 作者链 B; PDB构建体 1–379; UniProt 2–380 作者链 D; PDB构建体 1–379; UniProt 2–380 作者链 F; PDB构建体 1–379; UniProt 2–380 作者链 H; PDB构建体 1–379; UniProt 2–380

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

SAXS 散射曲线 SAXS Profile

SAXS profile for 1a9x

P(r) 距离分布 P(r) Distribution

P(r) distribution for 1a9x
下载 Download

2. 结构基本信息 2. Structure Basics

条目编号 entry_id1a9x
沉积日期 deposition_date1998-04-14
结构标题 titleCARBAMOYL PHOSPHATE SYNTHETASE: CAUGHT IN THE ACT OF GLUTAMINE HYDROLYSIS
关键词 keywordsAMIDOTRANSFERASE, THIOESTER; AMIDOTRANSFERASE
实验方法 methodX-RAY DIFFRACTION

3. SAXS 参数 (CRYSOL 理论计算) 3. SAXS Parameters (CRYSOL)

回转半径 Rg (Guinier) rg_guinier72.25
回转半径 Rg (电子) rg_electron72.31
零角强度 I(0) i05801610000.00
分子量 molecular_weight638650.0 kDa
排除体积 excluded_volume795920 ų
包络体积 envelope_volume1145400 ų
水化壳体积 shell_volume131300 ų
包络直径 envelope_diameter240.0
壳层 Rg shell_rg75.61
包络 Rg envelope_rg68.66
形状 Rg shape_rg72.34
总 Rg total_rg72.23
总原子数 total_atoms44683
残基数 n_residues5744
球谐函数阶数 n_harmonics20
q 范围 q_range— – 0.5000 −1
数据点数 n_points101
壳层类型 shell_typedirectional
溶剂电子密度 solvent_density0.3340 e/ų
壳层衬度 contrast_shell0.0300 e/ų
CRYSOL 版本 crysol_version4.1.3

4. P(r) 距离分布 (GNOM 反演) 4. P(r) Analysis (GNOM)

最大尺寸 Dmax dmax258.1
Rg (实空间) rg_real72.31
Rg 误差 (实空间) rg_real_error2.96
I(0) (实空间) i0_real5.8020e+09
I(0) 误差 (实空间) i0_real_error1.3660e+08
Rg (倒空间) rg_reciprocal71.91
I(0) (倒空间) i0_reciprocal5796000000.0000
解质量估计 total_estimate0.8572
解质量评级 solution_quality GOOD a GOOD solution
P(r) 峰数 n_peaks2
主峰位置 r_peak_primary93.8
偏度 Skewness skewness0.243
峰度 Kurtosis kurtosis-0.574
角度范围 angular_range— – 0.1100 −1
当前正则化参数 α current_alpha0.0009
最高正则化参数 α highest_alpha202800000.0000
实空间数据点数 n_real_points23
GNOM 版本 gnom_version4.1.3
质量判据 quality_criteria AN1: 0.000; Oscil: 0.790; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.770

5. 晶体学与实验 5. Crystallography & Experiment

6. 实体与聚合物信息 Entities & Polymers (10)

7. 折叠分类 (SCOP + CATH) 72 domains

SCOP 2.08 (32 domains)

结构域编号 domain_idd1a9xa1
类 Class classa — All alpha proteins
折叠类型 Fold folda.92 — Carbamoyl phosphate synthetase, large subunit connection domain
超家族 Superfamily superfamilya.92.1 — Carbamoyl phosphate synthetase, large subunit connection domain
家族 Family familya.92.1.1 — Carbamoyl phosphate synthetase, large subunit connection domain
结构域编号 domain_idd1a9xa2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.24 — Methylglyoxal synthase-like
超家族 Superfamily superfamilyc.24.1 — Methylglyoxal synthase-like
家族 Family familyc.24.1.1 — Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
结构域编号 domain_idd1a9xa3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.30 — PreATP-grasp domain
超家族 Superfamily superfamilyc.30.1 — PreATP-grasp domain
家族 Family familyc.30.1.1 — BC N-terminal domain-like
结构域编号 domain_idd1a9xa4
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.30 — PreATP-grasp domain
超家族 Superfamily superfamilyc.30.1 — PreATP-grasp domain
家族 Family familyc.30.1.1 — BC N-terminal domain-like
结构域编号 domain_idd1a9xa5
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.142 — ATP-grasp
超家族 Superfamily superfamilyd.142.1 — Glutathione synthetase ATP-binding domain-like
家族 Family familyd.142.1.2 — BC ATP-binding domain-like
结构域编号 domain_idd1a9xa6
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.142 — ATP-grasp
超家族 Superfamily superfamilyd.142.1 — Glutathione synthetase ATP-binding domain-like
家族 Family familyd.142.1.2 — BC ATP-binding domain-like
结构域编号 domain_idd1a9xb1
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamilyc.8.3 — Carbamoyl phosphate synthetase, small subunit N-terminal domain
家族 Family familyc.8.3.1 — Carbamoyl phosphate synthetase, small subunit N-terminal domain
结构域编号 domain_idd1a9xb2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.23 — Flavodoxin-like
超家族 Superfamily superfamilyc.23.16 — Class I glutamine amidotransferase-like
家族 Family familyc.23.16.1 — Class I glutamine amidotransferases (GAT)
结构域编号 domain_idd1a9xc1
类 Class classa — All alpha proteins
折叠类型 Fold folda.92 — Carbamoyl phosphate synthetase, large subunit connection domain
超家族 Superfamily superfamilya.92.1 — Carbamoyl phosphate synthetase, large subunit connection domain
家族 Family familya.92.1.1 — Carbamoyl phosphate synthetase, large subunit connection domain
结构域编号 domain_idd1a9xc2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.24 — Methylglyoxal synthase-like
超家族 Superfamily superfamilyc.24.1 — Methylglyoxal synthase-like
家族 Family familyc.24.1.1 — Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
结构域编号 domain_idd1a9xc3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.30 — PreATP-grasp domain
超家族 Superfamily superfamilyc.30.1 — PreATP-grasp domain
家族 Family familyc.30.1.1 — BC N-terminal domain-like
结构域编号 domain_idd1a9xc4
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.30 — PreATP-grasp domain
超家族 Superfamily superfamilyc.30.1 — PreATP-grasp domain
家族 Family familyc.30.1.1 — BC N-terminal domain-like
结构域编号 domain_idd1a9xc5
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.142 — ATP-grasp
超家族 Superfamily superfamilyd.142.1 — Glutathione synthetase ATP-binding domain-like
家族 Family familyd.142.1.2 — BC ATP-binding domain-like
结构域编号 domain_idd1a9xc6
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.142 — ATP-grasp
超家族 Superfamily superfamilyd.142.1 — Glutathione synthetase ATP-binding domain-like
家族 Family familyd.142.1.2 — BC ATP-binding domain-like
结构域编号 domain_idd1a9xd1
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamilyc.8.3 — Carbamoyl phosphate synthetase, small subunit N-terminal domain
家族 Family familyc.8.3.1 — Carbamoyl phosphate synthetase, small subunit N-terminal domain
结构域编号 domain_idd1a9xd2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.23 — Flavodoxin-like
超家族 Superfamily superfamilyc.23.16 — Class I glutamine amidotransferase-like
家族 Family familyc.23.16.1 — Class I glutamine amidotransferases (GAT)
结构域编号 domain_idd1a9xe1
类 Class classa — All alpha proteins
折叠类型 Fold folda.92 — Carbamoyl phosphate synthetase, large subunit connection domain
超家族 Superfamily superfamilya.92.1 — Carbamoyl phosphate synthetase, large subunit connection domain
家族 Family familya.92.1.1 — Carbamoyl phosphate synthetase, large subunit connection domain
结构域编号 domain_idd1a9xe2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.24 — Methylglyoxal synthase-like
超家族 Superfamily superfamilyc.24.1 — Methylglyoxal synthase-like
家族 Family familyc.24.1.1 — Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
结构域编号 domain_idd1a9xe3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.30 — PreATP-grasp domain
超家族 Superfamily superfamilyc.30.1 — PreATP-grasp domain
家族 Family familyc.30.1.1 — BC N-terminal domain-like
结构域编号 domain_idd1a9xe4
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.30 — PreATP-grasp domain
超家族 Superfamily superfamilyc.30.1 — PreATP-grasp domain
家族 Family familyc.30.1.1 — BC N-terminal domain-like
结构域编号 domain_idd1a9xe5
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.142 — ATP-grasp
超家族 Superfamily superfamilyd.142.1 — Glutathione synthetase ATP-binding domain-like
家族 Family familyd.142.1.2 — BC ATP-binding domain-like
结构域编号 domain_idd1a9xe6
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.142 — ATP-grasp
超家族 Superfamily superfamilyd.142.1 — Glutathione synthetase ATP-binding domain-like
家族 Family familyd.142.1.2 — BC ATP-binding domain-like
结构域编号 domain_idd1a9xf1
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamilyc.8.3 — Carbamoyl phosphate synthetase, small subunit N-terminal domain
家族 Family familyc.8.3.1 — Carbamoyl phosphate synthetase, small subunit N-terminal domain
结构域编号 domain_idd1a9xf2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.23 — Flavodoxin-like
超家族 Superfamily superfamilyc.23.16 — Class I glutamine amidotransferase-like
家族 Family familyc.23.16.1 — Class I glutamine amidotransferases (GAT)
结构域编号 domain_idd1a9xg1
类 Class classa — All alpha proteins
折叠类型 Fold folda.92 — Carbamoyl phosphate synthetase, large subunit connection domain
超家族 Superfamily superfamilya.92.1 — Carbamoyl phosphate synthetase, large subunit connection domain
家族 Family familya.92.1.1 — Carbamoyl phosphate synthetase, large subunit connection domain
结构域编号 domain_idd1a9xg2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.24 — Methylglyoxal synthase-like
超家族 Superfamily superfamilyc.24.1 — Methylglyoxal synthase-like
家族 Family familyc.24.1.1 — Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
结构域编号 domain_idd1a9xg3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.30 — PreATP-grasp domain
超家族 Superfamily superfamilyc.30.1 — PreATP-grasp domain
家族 Family familyc.30.1.1 — BC N-terminal domain-like
结构域编号 domain_idd1a9xg4
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.30 — PreATP-grasp domain
超家族 Superfamily superfamilyc.30.1 — PreATP-grasp domain
家族 Family familyc.30.1.1 — BC N-terminal domain-like
结构域编号 domain_idd1a9xg5
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.142 — ATP-grasp
超家族 Superfamily superfamilyd.142.1 — Glutathione synthetase ATP-binding domain-like
家族 Family familyd.142.1.2 — BC ATP-binding domain-like
结构域编号 domain_idd1a9xg6
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.142 — ATP-grasp
超家族 Superfamily superfamilyd.142.1 — Glutathione synthetase ATP-binding domain-like
家族 Family familyd.142.1.2 — BC ATP-binding domain-like
结构域编号 domain_idd1a9xh1
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamilyc.8.3 — Carbamoyl phosphate synthetase, small subunit N-terminal domain
家族 Family familyc.8.3.1 — Carbamoyl phosphate synthetase, small subunit N-terminal domain
结构域编号 domain_idd1a9xh2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.23 — Flavodoxin-like
超家族 Superfamily superfamilyc.23.16 — Class I glutamine amidotransferase-like
家族 Family familyc.23.16.1 — Class I glutamine amidotransferases (GAT)

CATH v4.4 (40 domains)

结构域编号 domain_id1a9xA01
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily20
结构域编号 domain_id1a9xA02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology470 — D-amino Acid Aminotransferase; Chain A, domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, B domain
结构域编号 domain_id1a9xA03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1490 — Dna Ligase; domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, A domain
结构域编号 domain_id1a9xA04
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology1030 — Carbamoyl Phosphate Synthetase; Chain A, domain 4
同源超家族 H-superfamily homologous superfamily10 — Carbamoyl-phosphate synthetase, large subunit oligomerisation domain
结构域编号 domain_id1a9xA05
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily20
结构域编号 domain_id1a9xA06
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology470 — D-amino Acid Aminotransferase; Chain A, domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, B domain
结构域编号 domain_id1a9xA07
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1490 — Dna Ligase; domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, A domain
结构域编号 domain_id1a9xA08
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily1380 — Methylglyoxal synthase-like domain
结构域编号 domain_id1a9xB01
类 Class class3 — Alpha Beta
架构 Architecture architecture50 — 3-Layer(bba) Sandwich
拓扑 Topology topology30 — Glucose Oxidase; domain 1
同源超家族 H-superfamily homologous superfamily20 — Carbamoyl-phosphate synthase small subunit, N-terminal domain
结构域编号 domain_id1a9xB02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily880 — Class I glutamine amidotransferase (GATase) domain
结构域编号 domain_id1a9xC01
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily20
结构域编号 domain_id1a9xC02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology470 — D-amino Acid Aminotransferase; Chain A, domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, B domain
结构域编号 domain_id1a9xC03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1490 — Dna Ligase; domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, A domain
结构域编号 domain_id1a9xC04
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology1030 — Carbamoyl Phosphate Synthetase; Chain A, domain 4
同源超家族 H-superfamily homologous superfamily10 — Carbamoyl-phosphate synthetase, large subunit oligomerisation domain
结构域编号 domain_id1a9xC05
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily20
结构域编号 domain_id1a9xC06
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology470 — D-amino Acid Aminotransferase; Chain A, domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, B domain
结构域编号 domain_id1a9xC07
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1490 — Dna Ligase; domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, A domain
结构域编号 domain_id1a9xC08
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily1380 — Methylglyoxal synthase-like domain
结构域编号 domain_id1a9xD01
类 Class class3 — Alpha Beta
架构 Architecture architecture50 — 3-Layer(bba) Sandwich
拓扑 Topology topology30 — Glucose Oxidase; domain 1
同源超家族 H-superfamily homologous superfamily20 — Carbamoyl-phosphate synthase small subunit, N-terminal domain
结构域编号 domain_id1a9xD02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily880 — Class I glutamine amidotransferase (GATase) domain
结构域编号 domain_id1a9xE01
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily20
结构域编号 domain_id1a9xE02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology470 — D-amino Acid Aminotransferase; Chain A, domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, B domain
结构域编号 domain_id1a9xE03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1490 — Dna Ligase; domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, A domain
结构域编号 domain_id1a9xE04
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology1030 — Carbamoyl Phosphate Synthetase; Chain A, domain 4
同源超家族 H-superfamily homologous superfamily10 — Carbamoyl-phosphate synthetase, large subunit oligomerisation domain
结构域编号 domain_id1a9xE05
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily20
结构域编号 domain_id1a9xE06
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology470 — D-amino Acid Aminotransferase; Chain A, domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, B domain
结构域编号 domain_id1a9xE07
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1490 — Dna Ligase; domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, A domain
结构域编号 domain_id1a9xE08
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily1380 — Methylglyoxal synthase-like domain
结构域编号 domain_id1a9xF01
类 Class class3 — Alpha Beta
架构 Architecture architecture50 — 3-Layer(bba) Sandwich
拓扑 Topology topology30 — Glucose Oxidase; domain 1
同源超家族 H-superfamily homologous superfamily20 — Carbamoyl-phosphate synthase small subunit, N-terminal domain
结构域编号 domain_id1a9xF02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily880 — Class I glutamine amidotransferase (GATase) domain
结构域编号 domain_id1a9xG01
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily20
结构域编号 domain_id1a9xG02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology470 — D-amino Acid Aminotransferase; Chain A, domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, B domain
结构域编号 domain_id1a9xG03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1490 — Dna Ligase; domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, A domain
结构域编号 domain_id1a9xG04
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology1030 — Carbamoyl Phosphate Synthetase; Chain A, domain 4
同源超家族 H-superfamily homologous superfamily10 — Carbamoyl-phosphate synthetase, large subunit oligomerisation domain
结构域编号 domain_id1a9xG05
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily20
结构域编号 domain_id1a9xG06
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology470 — D-amino Acid Aminotransferase; Chain A, domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, B domain
结构域编号 domain_id1a9xG07
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1490 — Dna Ligase; domain 1
同源超家族 H-superfamily homologous superfamily20 — ATP-grasp fold, A domain
结构域编号 domain_id1a9xG08
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily1380 — Methylglyoxal synthase-like domain
结构域编号 domain_id1a9xH01
类 Class class3 — Alpha Beta
架构 Architecture architecture50 — 3-Layer(bba) Sandwich
拓扑 Topology topology30 — Glucose Oxidase; domain 1
同源超家族 H-superfamily homologous superfamily20 — Carbamoyl-phosphate synthase small subunit, N-terminal domain
结构域编号 domain_id1a9xH02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily880 — Class I glutamine amidotransferase (GATase) domain

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