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1all

ALLOPHYCOCYANIN

Method: X-RAY DIFFRACTION D_max: 90.2 Å Quality: REASONABLE

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1all
deposition_date	1995-03-01
title	ALLOPHYCOCYANIN
keywords	LIGHT-HARVESTING PROTEIN, PHYCOBILIPROTEIN; LIGHT-HARVESTING PROTEIN
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	25.39 Å
rg_electron	24.97 Å
i0	21143700.00
molecular_weight	35524.0 kDa
excluded_volume	44656 Å³
envelope_volume	52913 Å³
shell_volume	19259 Å³
envelope_diameter	92.2 Å
shell_rg	29.68 Å
envelope_rg	25.23 Å
shape_rg	24.97 Å
total_rg	25.54 Å
total_atoms	2494
n_residues	320
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	90.2 Å
rg_real	25.64 Å
rg_real_error	0.79 Å
i0_real	2.1140e+07
i0_real_error	3.0820e+05
rg_reciprocal	25.57 Å
i0_reciprocal	21140000.0000
total_estimate	0.6063
solution_quality	REASONABLE a REASONABLE solution
n_peaks	2
r_peak_primary	21.5 Å
skewness	0.557
kurtosis	-0.347
angular_range	— – 0.3150 Å⁻¹
current_alpha	0.0000
highest_alpha	6433000.0000
n_real_points	64
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.593; Stabil: 1.000; Sysdev: 0.242; Positv: 1.000; Valcen: 0.422; Smooth: 0.948

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4. Crystallography & Experiment

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5. Entities & Polymer Info (4)

Entity 1 polymer

description	ALLOPHYCOCYANIN
formula_weight	17107.5 kDa
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	2586

SIVTKSIVNADAEARYLSPGELDRIKSFVTSGERRVRIAETMTGARERIIKQAGDQLFGKRPDVVSPGGNAYGADMTATCLRDLDYYLRLITYGIVAGDVTPIEEIGVVGVREMYKSLGTPIEAIAEGVRAMKSVATSLLSGADAAEAGSYFDYLIGAMS

Entity 2 polymer

description	ALLOPHYCOCYANIN
formula_weight	17273.7 kDa
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	B

MQDAITSVINSSDVQGKYLDASAIQKLKAYFATGELRVRAATTISANAANIVKEAVAKSLLYSDVTRPGGNMYTTRRYAACIRDLDYYLRYATYAMLAGDPSILDERVLNGLKETYNSLGVPIGATVQAIQAMKEVTAGLVGGGAGKEMGIYFDYICSGLS

Entity 3 non-polymer

description	PHYCOCYANOBILIN
formula_weight	588.7 kDa
src_method	syn
entity_count	2

Entity 4 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	92

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6. Citations (1)

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length_a	101.900 Å
length_b	101.900 Å
length_c	130.600 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	12

space_group	P 63 2 2
int_tables_number	182
crystal_system	—

resolution	2.300 Å
resolution_low	8.000 Å
r_factor	0.1960
r_work	0.1960
r_free	—

fit	/app/data/saxs_computation/al/1all/1all.fit
pddf	/app/data/pr_computation/al/1all/1all.pr.out
profile	/app/data/saxs_computation/al/1all/1all.dat

ALLOPHYCOCYANIN

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (4)

Entity 1 polymer

Polymer

Entity 2 polymer

Polymer

Entity 3 non-polymer

Entity 4 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)