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1anv

ADENOVIRUS 5 DBP/URANYL FLUORIDE SOAK

Method: X-RAY DIFFRACTION D_max: 62.6 Å Quality: REASONABLE

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1anv
deposition_date	1996-03-14
title	ADENOVIRUS 5 DBP/URANYL FLUORIDE SOAK
keywords	EARLY PROTEIN, DNA-BINDING PROTEIN, ZINC-FINGER, PHOSPHORYLATION, NUCLEAR PROTEIN, DNA BINDING PROTEIN; DNA BINDING PROTEIN
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	23.84 Å
rg_electron	22.89 Å
i0	25094200.00
molecular_weight	36199.0 kDa
excluded_volume	44040 Å³
envelope_volume	55905 Å³
shell_volume	21629 Å³
envelope_diameter	93.5 Å
shell_rg	28.03 Å
envelope_rg	24.38 Å
shape_rg	22.81 Å
total_rg	23.75 Å
total_atoms	2469
n_residues	314
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	62.6 Å
rg_real	22.12 Å
rg_real_error	0.11 Å
i0_real	2.3850e+07
i0_real_error	2.3570e+05
rg_reciprocal	24.01 Å
i0_reciprocal	25090000.0000
total_estimate	0.6886
solution_quality	REASONABLE a REASONABLE solution
n_peaks	1
r_peak_primary	27.4 Å
skewness	0.241
kurtosis	-0.425
angular_range	— – 0.3350 Å⁻¹
current_alpha	1.5470
highest_alpha	1627000.0000
n_real_points	65
gnom_version	4.1.3
quality_criteria	AN1: 0.003; Oscil: 0.993; Stabil: 0.991; Sysdev: 0.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.000

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4. Crystallography & Experiment

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5. Entities & Polymer Info (4)

Entity 1 polymer

description	ADENOVIRUS SINGLE-STRANDED DNA-BINDING PROTEIN
formula_weight	39899.7 kDa
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	2500

SVPIVSAWEKGMEAARALMDKYHVDNDLKANFKLLPDQVEALAAVCKTWLNEEHRGLQLTFTSNKTFVTMMGRFLQAYLQSFAEVTYKHHEPTGCALWLHRCAEIEGELKCLHGSIMINKEHVIEMDVTSENGQRALKEQSSKAKIVKNRWGRNVVQISNTDARCCVHDAACPANQFSGKSCGMFFSEGAKAQVAFKQIKAFMQALYPNAQTGHGHLLMPLRCECNSKPGHAPFLGRQLPKLTPFALSNAEDLDADLISDKSVLASVHHPALIVFQCCNPVYRNSRAQGGGPNCDFKISAPDLLNALVMVRSLWSENFTELPRMVVPEFKWSTKHQYRNVSLPVAHSDARQNPFDF

Entity 2 non-polymer

description	ZINC ION
formula_weight	65.4 kDa
src_method	syn
entity_count	2

Entity 3 non-polymer

description	URANYL (VI) ION
formula_weight	270.0 kDa
src_method	syn
entity_count	4

Entity 4 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	31

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6. Citations (3)

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length_a	79.700 Å
length_b	75.600 Å
length_c	60.600 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

resolution	2.700 Å
resolution_low	15.000 Å
r_factor	—
r_work	0.2040
r_free	0.3100

fit	/app/data/saxs_computation/an/1anv/1anv.fit
pddf	/app/data/pr_computation/an/1anv/1anv.pr.out
profile	/app/data/saxs_computation/an/1anv/1anv.dat

ADENOVIRUS 5 DBP/URANYL FLUORIDE SOAK

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction