1bde
HELICAL STRUCTURE OF POLYPEPTIDES FROM THE C-TERMINAL HALF OF HIV-1 VPR, NMR, 20 STRUCTURES
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1bde |
| deposition_date | 1998-05-07 |
| title | HELICAL STRUCTURE OF POLYPEPTIDES FROM THE C-TERMINAL HALF OF HIV-1 VPR, NMR, 20 STRUCTURES |
| keywords | AIDS, HIV, VIRAL PROTEIN, VPR FRAGMENT, HELIX; AIDS |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 14.67 Å |
| rg_electron | 14.63 Å |
| i0 | 79758000.00 |
| molecular_weight | 77692.0 kDa |
| excluded_volume | 98573 ų |
| envelope_volume | 14925 ų |
| shell_volume | 8056 ų |
| envelope_diameter | 65.0 Å |
| shell_rg | 21.65 Å |
| envelope_rg | 19.36 Å |
| shape_rg | 14.64 Å |
| total_rg | 14.83 Å |
| total_atoms | 11120 |
| n_residues | 660 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 58.9 Å |
| rg_real | 15.18 Å |
| rg_real_error | 0.70 Å |
| i0_real | 7.9760e+07 |
| i0_real_error | 1.0840e+06 |
| rg_reciprocal | 15.14 Å |
| i0_reciprocal | 79760000.0000 |
| total_estimate | 0.5423 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 6.7 Å |
| skewness | 0.614 |
| kurtosis | -0.543 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 7625.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.015; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.001; Smooth: 0.000 |