POLYGALACTURONASE FROM ERWINIA CAROTOVORA SSP. CAROTOVORA

Method: X-RAY DIFFRACTION D_max: 70.1 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1bhe
deposition_date	1998-06-05
title	POLYGALACTURONASE FROM ERWINIA CAROTOVORA SSP. CAROTOVORA
keywords	FAMILY 28 GLYCOSYL HYDROLASE, HYDROLYSES POLYGALACTURONIC ACID, GLYCOSIDASE; GLYCOSIDASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	21.58 Å
rg_electron	20.76 Å
i0	28191600.00
molecular_weight	40099.0 kDa
excluded_volume	50029 Å³
envelope_volume	58199 Å³
shell_volume	23182 Å³
envelope_diameter	70.1 Å
shell_rg	27.53 Å
envelope_rg	21.12 Å
shape_rg	20.71 Å
total_rg	21.74 Å
total_atoms	2813
n_residues	376
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	70.1 Å
rg_real	21.51 Å
rg_real_error	0.37 Å
i0_real	2.8190e+07
i0_real_error	3.7740e+05
rg_reciprocal	21.52 Å
i0_reciprocal	28190000.0000
total_estimate	0.8890
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	25.8 Å
skewness	0.284
kurtosis	-0.287
angular_range	— – 0.3700 Å⁻¹
current_alpha	0.0000
highest_alpha	3481000.0000
n_real_points	69
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.854; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.992

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (1)

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length_a	81.229 Å
length_b	53.033 Å
length_c	103.093 Å
angle_alpha	90.00 °
angle_beta	112.59 °
angle_gamma	90.00 °
z_pdb	4

space_group	C 1 2 1
int_tables_number	5
crystal_system	—

resolution	1.900 Å
resolution_low	12.500 Å
r_factor	—
r_work	0.1980
r_free	0.2390

description	POLYGALACTURONASE
formula_weight	40135.2 kDa
ec_number	3.2.1.15
src_method	man
entity_count	1

type	polypeptide(L)
strand_id	A
atom_count	3108

POLYGALACTURONASE FROM ERWINIA CAROTOVORA SSP. CAROTOVORA

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Pectobacterium carotovorum subsp. carotovorum
ncbi_taxonomy_id	555
host_organism	Bacillus subtilis

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	295

fit	/app/data/saxs_computation/bh/1bhe/1bhe.fit
pddf	/app/data/pr_computation/bh/1bhe/1bhe.pr.out
profile	/app/data/saxs_computation/bh/1bhe/1bhe.dat