1bmd
;DETERMINANTS OF PROTEIN THERMOSTABILITY OBSERVED IN THE 1.9 ANGSTROMS CRYSTAL STRUCTURE OF MALATE DEHYDROGENASE FROM THE THERMOPHILIC BACTERIUM THERMUS FLAVUS ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1bmd |
| deposition_date | 1992-11-10 |
| title | ;DETERMINANTS OF PROTEIN THERMOSTABILITY OBSERVED IN THE 1.9 ANGSTROMS CRYSTAL STRUCTURE OF MALATE DEHYDROGENASE FROM THE THERMOPHILIC BACTERIUM THERMUS FLAVUS ; |
| keywords | OXIDOREDUCTASE(CHOH(D)-NAD+(A)); OXIDOREDUCTASE(CHOH(D)-NAD+(A)) |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 27.16 Å |
| rg_electron | 26.40 Å |
| i0 | 85330900.00 |
| molecular_weight | 71938.0 kDa |
| excluded_volume | 89991 ų |
| envelope_volume | 105980 ų |
| shell_volume | 33187 ų |
| envelope_diameter | 91.1 Å |
| shell_rg | 33.99 Å |
| envelope_rg | 26.41 Å |
| shape_rg | 26.42 Å |
| total_rg | 27.12 Å |
| total_atoms | 5050 |
| n_residues | 654 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 85.5 Å |
| rg_real | 27.12 Å |
| rg_real_error | 0.51 Å |
| i0_real | 8.5330e+07 |
| i0_real_error | 1.2310e+06 |
| rg_reciprocal | 27.13 Å |
| i0_reciprocal | 85330000.0000 |
| total_estimate | 0.8994 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 29.5 Å |
| skewness | 0.317 |
| kurtosis | -0.438 |
| angular_range | — – 0.2900 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 33410000.0000 |
| n_real_points | 59 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.920; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.928 |