HUMAN 3-METHYLADENINE DNA GLYCOSYLASE COMPLEXED TO DNA

entry_id	1bnk
deposition_date	1998-07-29
title	HUMAN 3-METHYLADENINE DNA GLYCOSYLASE COMPLEXED TO DNA
keywords	DNA REPAIR, DNA GLYCOSYLASE, HYDROLASE-DNA COMPLEX; HYDROLASE/DNA
method	X-RAY DIFFRACTION

rg_guinier	19.52 Å
rg_electron	18.23 Å
i0	21286200.00
molecular_weight	29796.0 kDa
excluded_volume	35022 ų
envelope_volume	41426 ų
shell_volume	18983 ų
envelope_diameter	61.9 Å
shell_rg	24.59 Å
envelope_rg	18.55 Å
shape_rg	18.19 Å
total_rg	19.12 Å
total_atoms	2064
n_residues	225
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	61.7 Å
rg_real	19.40 Å
rg_real_error	0.37 Å
i0_real	2.1290e+07
i0_real_error	2.5710e+05
rg_reciprocal	19.42 Å
i0_reciprocal	21290000.0000
total_estimate	0.8997
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	25.2 Å
skewness	0.149
kurtosis	-0.441
angular_range	— – 0.4050 Å−1
current_alpha	0.0000
highest_alpha	2314000.0000
n_real_points	72
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.903; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.983

Unit Cell

length_a	43.750 Å
length_b	57.100 Å
length_c	128.450 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

Symmetry

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

Refinement

resolution	2.700 Å
resolution_low	8.000 Å
r_factor	0.2160
r_work	0.2160
r_free	0.2600

Diffraction

temperature

113.0 K

Files (7)

• pr_distribution /app/data/pr_computation/bn/1bnk/pr_distribution.json
• pr_output /app/data/pr_computation/bn/1bnk/1bnk.pr.out
• pr_plot /app/data/visualization/pr_computation/bn/1bnk/1bnk_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/bn/1bnk/1bnk.dat
• saxs_fit /app/data/saxs_computation/bn/1bnk/1bnk.fit
• saxs_log /app/data/saxs_computation/bn/1bnk/1bnk.log
• saxs_plot /app/data/visualization/saxs_computation/bn/1bnk/1bnk_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/bn/1bnk/1bnk.fit
pddf	/app/data/pr_computation/bn/1bnk/1bnk.pr.out
profile	/app/data/saxs_computation/bn/1bnk/1bnk.dat