1bwm

A SINGLE-CHAIN T CELL RECEPTOR

Method: SOLUTION NMR Dmax: 69.2 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

No usable UniProt protein identity is available for this entry.

七张关系表仍保留该条目的 assembly 与组成信息,但缺少统一蛋白身份时,不能可靠建立跨 PDB 的同蛋白Chain接。

Assembly Composition of the Current Entry

Assembly Oligomeric State 实体与Construct证据 Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein monomer Monomer 蛋白 1 / DNA 0 / RNA 0 / 其他Polymer 0 PDB declaration: monomeric Entity 1:PROTEIN (ALPHA-BETA T CELL RECEPTOR (TCR) (D10)) × 1 缺少 UniProt 身份时不显示参考序列区间 Entity 1Fragment:VARIABLE DOMAINS FROM ALPHA AND BETA CHAINS Entity 1Mutation:C415S No recorded non-water small molecule SOLUTION NMR NMR measurement conditions:pH 5;298 K;Ionic strength (raw mmCIF value) 20 mM SODIUM ACETATE;Pressure 1 Resolution not provided

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 1bwm

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 1bwm
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2. Structure Basics 2. Structure Basics

Entry ID entry_id1bwm
Deposition date deposition_date1998-09-23
Structure title titleA SINGLE-CHAIN T CELL RECEPTOR
Keywords keywordsIMMUNOGLOBULIN, IMMUNORECEPTOR, IMMUNE SYSTEM; IMMUNE SYSTEM
Experimental Method methodSOLUTION NMR

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier20.17
Radius of gyration Rg (electron density) rg_electron19.66
Forward intensity I(0) i02473810000.00
Molecular weight molecular_weight404170.0 kDa
Excluded volume excluded_volume498120 ų
Envelope volume envelope_volume92417 ų
Hydration-shell volume shell_volume30890 ų
Envelope diameter envelope_diameter79.6
Shell Rg shell_rg32.52
Envelope Rg envelope_rg25.50
Shape Rg shape_rg19.63
Total Rg total_rg19.99
Total atoms total_atoms55635
Residues n_residues3735
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax69.2
Rg (real space) rg_real20.14
Rg uncertainty (real space) rg_real_error0.55
I(0) (real space) i0_real2.4740e+09
I(0) uncertainty (real space) i0_real_error3.4450e+07
Rg (reciprocal space) rg_reciprocal20.14
I(0) (reciprocal space) i0_reciprocal2474000000.0000
Solution quality estimate total_estimate0.8004
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks3
Primary peak position r_peak_primary23.7
Skewness Skewness skewness0.311
Kurtosis Kurtosis kurtosis-0.283
Angular range angular_range— – 0.3950 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha2924000.0000
Real-space data points n_real_points71
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.807; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.984; Smooth: 0.000

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (1)

7. Fold Classification (SCOP + CATH) 4 domains

SCOP 2.08 (2 domains)

Domain ID domain_idd1bwma1
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd1bwma2
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)

CATH v4.4 (2 domains)

Domain ID domain_id1bwmA01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id1bwmA02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins

8. Citations (2)

9. Files and Curves (10)