THE CRYSTAL STRUCTURE OF A CYANOGENIC BETA-GLUCOSIDASE FROM WHITE CLOVER (TRIFOLIUM REPENS L.), A FAMILY 1 GLYCOSYL-HYDROLASE

Method: X-RAY DIFFRACTION D_max: 69.1 Å Quality: EXCELLENT

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1cbg
deposition_date	1995-07-31
title	THE CRYSTAL STRUCTURE OF A CYANOGENIC BETA-GLUCOSIDASE FROM WHITE CLOVER (TRIFOLIUM REPENS L.), A FAMILY 1 GLYCOSYL-HYDROLASE
keywords	CYANOGENIC BETA-GLUCOSIDASE, HYDROLASE (O-GLYCOSYL); HYDROLASE (O-GLYCOSYL)
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	23.21 Å
rg_electron	21.88 Å
i0	50089900.00
molecular_weight	56335.0 kDa
excluded_volume	70868 Å³
envelope_volume	82026 Å³
shell_volume	29681 Å³
envelope_diameter	71.1 Å
shell_rg	30.15 Å
envelope_rg	22.24 Å
shape_rg	21.83 Å
total_rg	22.99 Å
total_atoms	3993
n_residues	490
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	69.1 Å
rg_real	23.02 Å
rg_real_error	0.26 Å
i0_real	5.0090e+07
i0_real_error	5.7640e+05
rg_reciprocal	23.07 Å
i0_reciprocal	50090000.0000
total_estimate	0.9050
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	29.8 Å
skewness	0.079
kurtosis	-0.486
angular_range	— – 0.3400 Å⁻¹
current_alpha	0.0000
highest_alpha	11500000.0000
n_real_points	66
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.936; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.971; Smooth: 0.982

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (2)

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length_a	70.326 Å
length_b	70.326 Å
length_c	249.096 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 41 21 2
int_tables_number	92
crystal_system	—

resolution	2.150 Å
resolution_low	9.000 Å
r_factor	0.1950
r_work	0.1950
r_free	0.2470

description	CYANOGENIC BETA-GLUCOSIDASE
formula_weight	56419.7 kDa
ec_number	3.2.1.21
src_method	nat
entity_count	1

type	polypeptide(L)
strand_id	A
atom_count	4429

THE CRYSTAL STRUCTURE OF A CYANOGENIC BETA-GLUCOSIDASE FROM WHITE CLOVER (TRIFOLIUM REPENS L.), A FAMILY 1 GLYCOSYL-HYDROLASE

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Entity 2 water

6. Citations (2)

7. Files & Curves (10)

Files (7)

Curves (3)

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	436

fit	/app/data/saxs_computation/cb/1cbg/1cbg.fit
pddf	/app/data/pr_computation/cb/1cbg/1cbg.pr.out
profile	/app/data/saxs_computation/cb/1cbg/1cbg.dat