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1cij

HALOALKANE DEHALOGENASE SOAKED WITH HIGH CONCENTRATION OF BROMIDE

Method: X-RAY DIFFRACTION D_max: 56.8 Å Quality: EXCELLENT

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1cij
deposition_date	1999-03-31
title	HALOALKANE DEHALOGENASE SOAKED WITH HIGH CONCENTRATION OF BROMIDE
keywords	DEHALOGENASE, COLLISION COMPLEX, ALPHA/BETA-HYDROLASE, HYDROLASE; HYDROLASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	19.29 Å
rg_electron	17.79 Å
i0	21165000.00
molecular_weight	35353.0 kDa
excluded_volume	44108 Å³
envelope_volume	47901 Å³
shell_volume	21480 Å³
envelope_diameter	57.1 Å
shell_rg	25.16 Å
envelope_rg	18.08 Å
shape_rg	17.78 Å
total_rg	18.76 Å
total_atoms	2481
n_residues	310
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	56.8 Å
rg_real	19.10 Å
rg_real_error	0.21 Å
i0_real	2.1160e+07
i0_real_error	2.4290e+05
rg_reciprocal	19.13 Å
i0_reciprocal	21170000.0000
total_estimate	0.9037
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	25.6 Å
skewness	0.017
kurtosis	-0.525
angular_range	— – 0.4100 Å⁻¹
current_alpha	0.0000
highest_alpha	8456000.0000
n_real_points	72
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.928; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.969; Smooth: 0.991

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

Entity 1 polymer

description	PROTEIN (HALOALKANE DEHALOGENASE)
formula_weight	35161.8 kDa
ec_number	3.8.1.5
mutation	I2V
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	2641

MVNAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE

Source

organism	Xanthobacter autotrophicus
ncbi_taxonomy_id	280
host_organism	Escherichia coli

Entity 2 non-polymer

description	BROMIDE ION
formula_weight	79.9 kDa
src_method	syn
entity_count	3

Entity 3 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	160

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6. Citations (5)

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length_a	93.407 Å
length_b	71.964 Å
length_c	40.968 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

space_group	P 21 21 2
int_tables_number	18
crystal_system	—

resolution	2.300 Å
resolution_low	20.000 Å
r_factor	—
r_work	0.2260
r_free	0.2720

fit	/app/data/saxs_computation/ci/1cij/1cij.fit
pddf	/app/data/pr_computation/ci/1cij/1cij.pr.out
profile	/app/data/saxs_computation/ci/1cij/1cij.dat

HALOALKANE DEHALOGENASE SOAKED WITH HIGH CONCENTRATION OF BROMIDE

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction