ACTIN-FRAGMIN KINASE, CATALYTIC DOMAIN FROM PHYSARUM POLYCEPHALUM

Method: X-RAY DIFFRACTION D_max: 115.3 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1cja
deposition_date	1999-04-08
title	ACTIN-FRAGMIN KINASE, CATALYTIC DOMAIN FROM PHYSARUM POLYCEPHALUM
keywords	KINASE, ACTIN, TRANSFERASE; TRANSFERASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	33.93 Å
rg_electron	33.89 Å
i0	84839000.00
molecular_weight	73322.0 kDa
excluded_volume	91814 Å³
envelope_volume	115590 Å³
shell_volume	30287 Å³
envelope_diameter	116.1 Å
shell_rg	37.85 Å
envelope_rg	33.83 Å
shape_rg	33.90 Å
total_rg	34.15 Å
total_atoms	6286
n_residues	654
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	115.3 Å
rg_real	34.23 Å
rg_real_error	1.14 Å
i0_real	8.4840e+07
i0_real_error	1.6070e+06
rg_reciprocal	34.05 Å
i0_reciprocal	84830000.0000
total_estimate	0.7846
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	27.0 Å
skewness	0.493
kurtosis	-0.573
angular_range	— – 0.2350 Å⁻¹
current_alpha	0.0000
highest_alpha	42460000.0000
n_real_points	48
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.643; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.496; Smooth: 0.771

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (1)

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length_a	178.900 Å
length_b	178.900 Å
length_c	59.300 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	12

space_group	P 32 2 1
int_tables_number	154
crystal_system	—

resolution	2.900 Å
resolution_low	15.000 Å
r_factor	—
r_work	0.1980
r_free	0.2720

description	PROTEIN (ACTIN-FRAGMIN KINASE)
formula_weight	38099.6 kDa
src_method	man
entity_count	2

type	polypeptide(L)
strand_id	A,B
atom_count	6286

ACTIN-FRAGMIN KINASE, CATALYTIC DOMAIN FROM PHYSARUM POLYCEPHALUM

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 non-polymer

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Physarum polycephalum
ncbi_taxonomy_id	5791
host_organism	Escherichia coli

description	ADENOSINE MONOPHOSPHATE
formula_weight	347.2 kDa
src_method	syn
entity_count	2

fit	/app/data/saxs_computation/cj/1cja/1cja.fit
pddf	/app/data/pr_computation/cj/1cja/1cja.pr.out
profile	/app/data/saxs_computation/cj/1cja/1cja.dat