1d0r

SOLUTION STRUCTURE OF GLUCAGON-LIKE PEPTIDE-1-(7-36)-AMIDE IN TRIFLUOROETHANOL/WATER

Method: SOLUTION NMR Dmax: 53.8 Å Quality: REASONABLE

1. Protein Identity and Related Structures Protein Identity & Related Structures

GLUCAGON-LIKE PEPTIDE-1-(7-36)-AMIDE

Homo sapiens

UniProt P01275

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein monomer Monomer Protein × 1 PDB declaration: monomeric(1) Consistent with protein copy count Chain A; UniProt 98–127 Not recorded No other associated polymer SOLUTION NMR NMR measurement conditions:pH 2.5;300 K;Pressure AMBIENT NMR sample composition:1.4MM GLUCAGON-LIKE PEPTIDE 1-(7-36)-AMIDE NMR sample composition:1.4MM GLUCAGON-LIKE PEPTIDE 1-(7-36)-AMIDE Resolution not provided

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

33 other PDB entries and 38 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name GLUC_HUMAN
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–30; UniProt 98–127

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 1d0r

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 1d0r
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2. Structure Basics 2. Structure Basics

Entry ID entry_id1d0r
Deposition date deposition_date1999-09-14
Structure title titleSOLUTION STRUCTURE OF GLUCAGON-LIKE PEPTIDE-1-(7-36)-AMIDE IN TRIFLUOROETHANOL/WATER
Keywords keywordsSYNTHETIC HORMONE, HORMONE-GROWTH FACTOR COMPLEX; HORMONE/GROWTH FACTOR
Experimental Method methodSOLUTION NMR

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier12.65
Radius of gyration Rg (electron density) rg_electron12.99
Forward intensity I(0) i061950800.00
Molecular weight molecular_weight65953.0 kDa
Excluded volume excluded_volume82488 ų
Envelope volume envelope_volume13394 ų
Hydration-shell volume shell_volume8326 ų
Envelope diameter envelope_diameter53.6
Shell Rg shell_rg19.47
Envelope Rg envelope_rg16.18
Shape Rg shape_rg12.98
Total Rg total_rg13.29
Total atoms total_atoms9160
Residues n_residues600
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax53.8
Rg (real space) rg_real13.04
Rg uncertainty (real space) rg_real_error0.84
I(0) (real space) i0_real6.1950e+07
I(0) uncertainty (real space) i0_real_error8.5380e+05
Rg (reciprocal space) rg_reciprocal13.01
I(0) (reciprocal space) i0_reciprocal61950000.0000
Solution quality estimate total_estimate0.5442
Solution quality rating solution_quality REASONABLE a REASONABLE solution
P(r) peaks n_peaks4
Primary peak position r_peak_primary6.8
Skewness Skewness skewness0.629
Kurtosis Kurtosis kurtosis-0.464
Angular range angular_range— – 0.5000 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha6699.0000
Real-space data points n_real_points80
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.025; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.001; Smooth: 0.000

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (1)

7. Fold Classification (SCOP + CATH) 1 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1d0ra_
Class classj — Peptides
Fold Fold foldj.6 — Peptide hormones
Superfamily Superfamily superfamilyj.6.1 — Peptide hormones
Family Family familyj.6.1.1 — Peptide hormones

8. Citations (2)

9. Files and Curves (10)