1d1k
MUTATED SHIGA-LIKE TOXIN B SUBUNIT (D17E/W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d1k |
| deposition_date | 1999-09-17 |
| title | MUTATED SHIGA-LIKE TOXIN B SUBUNIT (D17E/W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE |
| keywords | TOXIN, RECEPTOR BINDING, PROTEIN-CARBOHYDRATE RECOGNITION, OB-FOLD; TOXIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 22.74 Å |
| rg_electron | 21.47 Å |
| i0 | 28763200.00 |
| molecular_weight | 40475.0 kDa |
| excluded_volume | 50296 ų |
| envelope_volume | 57629 ų |
| shell_volume | 22412 ų |
| envelope_diameter | 67.4 Å |
| shell_rg | 28.08 Å |
| envelope_rg | 21.27 Å |
| shape_rg | 21.42 Å |
| total_rg | 22.39 Å |
| total_atoms | 2830 |
| n_residues | 345 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 67.7 Å |
| rg_real | 22.62 Å |
| rg_real_error | 0.32 Å |
| i0_real | 2.8760e+07 |
| i0_real_error | 3.8210e+05 |
| rg_reciprocal | 22.65 Å |
| i0_reciprocal | 28760000.0000 |
| total_estimate | 0.9149 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 31.8 Å |
| skewness | 0.114 |
| kurtosis | -0.612 |
| angular_range | — – 0.3500 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 7417000.0000 |
| n_real_points | 67 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.974; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.970 |