1d2j
LDL RECEPTOR LIGAND-BINDING MODULE 6
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d2j |
| deposition_date | 1999-09-23 |
| title | LDL RECEPTOR LIGAND-BINDING MODULE 6 |
| keywords | RECEPTOR, LDLR, CYSTEINE-RICH MODULE, CALCIUM LIGAND-BINDING, FAMILIAL HYPERCHOLESTEROLEMIA, SIGNALING PROTEIN; SIGNALING PROTEIN |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 15.97 Å |
| rg_electron | 15.73 Å |
| i0 | 175074000.00 |
| molecular_weight | 90078.0 kDa |
| excluded_volume | 104760 ų |
| envelope_volume | 51421 ų |
| shell_volume | 21953 ų |
| envelope_diameter | 60.6 Å |
| shell_rg | 26.07 Å |
| envelope_rg | 19.28 Å |
| shape_rg | 15.73 Å |
| total_rg | 16.26 Å |
| total_atoms | 11460 |
| n_residues | 800 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 58.9 Å |
| rg_real | 15.97 Å |
| rg_real_error | 0.39 Å |
| i0_real | 1.7510e+08 |
| i0_real_error | 2.0270e+06 |
| rg_reciprocal | 15.97 Å |
| i0_reciprocal | 175100000.0000 |
| total_estimate | 0.8328 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 18.6 Å |
| skewness | 0.380 |
| kurtosis | -0.238 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 2181000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.676; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.796; Smooth: 0.999 |