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1dar

ELONGATION FACTOR G IN COMPLEX WITH GDP

Method: X-RAY DIFFRACTION D_max: 113.6 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1dar
deposition_date	1996-02-15
title	ELONGATION FACTOR G IN COMPLEX WITH GDP
keywords	RIBOSOMAL TRANSLOCASE, TRANSLATIONAL GTPASE; TRANSLATIONAL GTPASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	31.98 Å
rg_electron	32.14 Å
i0	72216700.00
molecular_weight	67621.0 kDa
excluded_volume	84853 Å³
envelope_volume	111180 Å³
shell_volume	31113 Å³
envelope_diameter	119.8 Å
shell_rg	36.10 Å
envelope_rg	32.32 Å
shape_rg	32.15 Å
total_rg	32.44 Å
total_atoms	4760
n_residues	619
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	113.6 Å
rg_real	32.37 Å
rg_real_error	1.18 Å
i0_real	7.2220e+07
i0_real_error	1.1760e+06
rg_reciprocal	32.20 Å
i0_reciprocal	72210000.0000
total_estimate	0.8254
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	31.8 Å
skewness	0.622
kurtosis	-0.019
angular_range	— – 0.2500 Å⁻¹
current_alpha	0.0000
highest_alpha	11070000.0000
n_real_points	51
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.720; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.803; Smooth: 0.763

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

Entity 1 polymer

description	ELONGATION FACTOR G
formula_weight	76977.1 kDa
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	4893

MAVKVEYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLKREFKVDANVGKPQVAYRETITKPVDVEGKFIRQTGGRGQYGHVKIKVEPLPRGSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLIKGQ

Entity 2 non-polymer

description	GUANOSINE-5'-DIPHOSPHATE
formula_weight	443.2 kDa
src_method	syn
entity_count	1

Entity 3 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	133

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6. Citations (3)

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length_a	76.300 Å
length_b	106.400 Å
length_c	115.600 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

resolution	2.400 Å
resolution_low	8.000 Å
r_factor	0.2200
r_work	0.2200
r_free	0.2900

fit	/app/data/saxs_computation/da/1dar/1dar.fit
pddf	/app/data/pr_computation/da/1dar/1dar.pr.out
profile	/app/data/saxs_computation/da/1dar/1dar.dat

ELONGATION FACTOR G IN COMPLEX WITH GDP

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (3)

Entity 1 polymer

Polymer

Entity 2 non-polymer

Entity 3 water

6. Citations (3)

7. Files & Curves (10)

Files (7)

Curves (3)