1dbu
Crystal structure of cysteinyl-tRNA(Pro) deacylase protein from H. influenzae (HI1434)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dbu |
| deposition_date | 1999-11-03 |
| title | Crystal structure of cysteinyl-tRNA(Pro) deacylase protein from H. influenzae (HI1434) |
| keywords | STRUCTURAL GENOMICS, YBAK, Structure 2 Function Project, S2F, HYDROLASE; HYDROLASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 16.01 Å |
| rg_electron | 14.83 Å |
| i0 | 5391840.00 |
| molecular_weight | 16739.0 kDa |
| excluded_volume | 20976 ų |
| envelope_volume | 24261 ų |
| shell_volume | 13721 ų |
| envelope_diameter | 52.4 Å |
| shell_rg | 20.83 Å |
| envelope_rg | 15.22 Å |
| shape_rg | 14.84 Å |
| total_rg | 15.99 Å |
| total_atoms | 1157 |
| n_residues | 150 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 51.1 Å |
| rg_real | 15.90 Å |
| rg_real_error | 0.31 Å |
| i0_real | 5.3920e+06 |
| i0_real_error | 6.7480e+04 |
| rg_reciprocal | 15.91 Å |
| i0_reciprocal | 5392000.0000 |
| total_estimate | 0.8091 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 20.7 Å |
| skewness | 0.120 |
| kurtosis | -0.402 |
| angular_range | — – 0.4950 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1184000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.840; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.000 |