1dbx
Crystal structure of cysteinyl-tRNA(Pro) deacylase from H. influenzae (HI1434)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dbx |
| deposition_date | 1999-11-03 |
| title | Crystal structure of cysteinyl-tRNA(Pro) deacylase from H. influenzae (HI1434) |
| keywords | STRUCTURAL GENOMICS, YBAK, Structure 2 Function Project, S2F, HYDROLASE; HYDROLASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 20.91 Å |
| rg_electron | 20.43 Å |
| i0 | 18029300.00 |
| molecular_weight | 32962.0 kDa |
| excluded_volume | 41739 ų |
| envelope_volume | 50625 ų |
| shell_volume | 20999 ų |
| envelope_diameter | 74.7 Å |
| shell_rg | 26.54 Å |
| envelope_rg | 20.37 Å |
| shape_rg | 20.45 Å |
| total_rg | 21.24 Å |
| total_atoms | 2304 |
| n_residues | 300 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 71.2 Å |
| rg_real | 20.86 Å |
| rg_real_error | 0.55 Å |
| i0_real | 1.8030e+07 |
| i0_real_error | 2.3680e+05 |
| rg_reciprocal | 20.88 Å |
| i0_reciprocal | 18030000.0000 |
| total_estimate | 0.7928 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 24.8 Å |
| skewness | 0.320 |
| kurtosis | -0.267 |
| angular_range | — – 0.3800 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 5234000.0000 |
| n_real_points | 70 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.771; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.994; Smooth: 0.000 |